BLASTX nr result

ID: Papaver23_contig00024992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024992
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    74   1e-11
ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c...    72   5e-11
ref|XP_002514227.1| zinc finger protein, putative [Ricinus commu...    72   6e-11
ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    71   1e-10
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = -1

Query: 286 VVSNMPTVAMDDTVCIVCMEGPHDHQADHDETDHHQEVVGKQMPCNHVYHANCISTWLSR 107
           +V+ +PTVA  D VC VCME            D   +  GKQ+PC HVYH +C+S+WLS 
Sbjct: 44  MVAELPTVAAADDVCAVCME------------DFLPDEGGKQIPCGHVYHQSCLSSWLSI 91

Query: 106 YNSCPLCRCTI 74
            +SCPLCRC I
Sbjct: 92  RDSCPLCRCHI 102


>ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
           gi|223546684|gb|EEF48182.1| hypothetical protein
           RCOM_1049910 [Ricinus communis]
          Length = 109

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = -1

Query: 289 AVVSNMPTVAMDDT--VCIVCMEGPHDHQADHDETDHHQEVVGKQMPCNHVYHANCISTW 116
           ++V++MPTV   D   VC +CMEG                V GKQ+PC HVYHA CIS+W
Sbjct: 42  SLVADMPTVTSTDDHDVCSICMEGFQS-----------PGVCGKQVPCGHVYHAPCISSW 90

Query: 115 LSRYNSCPLCRCTI 74
           LS  NSCPLCR  I
Sbjct: 91  LSNCNSCPLCRFNI 104


>ref|XP_002514227.1| zinc finger protein, putative [Ricinus communis]
           gi|223546683|gb|EEF48181.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 109

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = -1

Query: 289 AVVSNMPTVAM----DDTVCIVCMEGPHDHQADHDETDHHQEVVGKQMPCNHVYHANCIS 122
           ++V+NMP V++    DD+VC VCMEG               ++ GKQ+ C HVYHA CIS
Sbjct: 43  SLVANMPMVSVSTEDDDSVCSVCMEG------------FQSDMGGKQVQCGHVYHAACIS 90

Query: 121 TWLSRYNSCPLCRCTI 74
           +WLS  +SCPLCR  I
Sbjct: 91  SWLSNSSSCPLCRFNI 106


>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = -1

Query: 289 AVVSNMPTVAMDDTVCIVCMEGPHDHQADHDETDHHQEVVGKQMPCNHVYHANCISTWLS 110
           ++VS MPTV   D  C VC EG    +             GKQ+PC H YHA CI++WLS
Sbjct: 40  SMVSTMPTVTAVDA-CTVCREGFQSGEG------------GKQLPCGHFYHAGCIASWLS 86

Query: 109 RYNSCPLCRCTI 74
             NSCPLCRC++
Sbjct: 87  LRNSCPLCRCSV 98


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = -1

Query: 289 AVVSNMPTVAMDDTVCIVCMEGPHDHQADHDETDHHQEVVGKQMPCNHVYHANCISTWLS 110
           ++VS MPTV   D  C VC EG    +             GKQ+PC H YHA CI++WLS
Sbjct: 106 SMVSTMPTVTAVDA-CTVCREGFQSGEG------------GKQLPCGHFYHAGCIASWLS 152

Query: 109 RYNSCPLCRCTI 74
             NSCPLCRC++
Sbjct: 153 LRNSCPLCRCSV 164


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