BLASTX nr result

ID: Papaver23_contig00024965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024965
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   459   e-127
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   440   e-121
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]    421   e-115
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...   420   e-115
ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512...   409   e-112

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|297737327|emb|CBI26528.3|
            unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  459 bits (1182), Expect = e-127
 Identities = 233/355 (65%), Positives = 281/355 (79%), Gaps = 1/355 (0%)
 Frame = -1

Query: 1205 GSLNLLSDSWDLHADRVLPFLTENTDFTXXXXXXXXXXGKSTILNEIYGSDGSSSGMLPP 1026
            GSLNLLSDSW+ H DR LPFLT+NTDFT          GKSTI+NE+YG DGSS GMLPP
Sbjct: 66   GSLNLLSDSWEFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPGMLPP 125

Query: 1025 FMTQSEETRAMAKHCSVGIELRVSSERLILLDTQPIFSPSVLAELMRPDGSSTIALTNGE 846
            F  QSE+ RAMA+HC+VGIE R+S+ERLILLDTQP+FSPSVLAE+MRPDGSSTI++  GE
Sbjct: 126  FAIQSEDIRAMARHCTVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLGGE 185

Query: 845  TLSADLAHEMMGIQLGVFLASICHVLLVVSEGAHDINMWHLMLTVDLLKHGIPDPSSLAP 666
            +LS++LAHE+MGIQLGV LASICH+LLV+S+G HDINMW LMLTVDLLKHGIPD SSL P
Sbjct: 186  SLSSELAHELMGIQLGVLLASICHILLVISDGVHDINMWRLMLTVDLLKHGIPDLSSLTP 245

Query: 665  SYSQTPNMGSEKEPKDNMQEAVIEYLAAPVFVHTKLWDEDLSPDKATWMRKRLSHYFSSS 486
            S+SQ  N+GS+KE KD + E   EYLAAP+FVHTKL D+D++P     +RK L+ +FSSS
Sbjct: 246  SHSQNSNLGSDKEGKDKVLEGGEEYLAAPIFVHTKLRDQDITPRNFVHLRKALAQFFSSS 305

Query: 485  SFKGTK-SETTAEEQNDYVEPHVINADNLSSMGMNLVLLPHRNQDDSVTAQYESYVTLIE 309
            +F   K   TT E     V P++ + D L S   NL L+P +++ DS  AQYESY +++ 
Sbjct: 306  TFVKEKCGNTTKEHLVSSVPPNMPSTD-LDSTLPNLFLVPCKSKVDSPRAQYESYTSMLW 364

Query: 308  KLRDQVLSMNCRPFAKTVSEREWLKNSARIWETVKNSAIIAEYCKTLQGSGMFRK 144
            KLRDQVLSMNC  FA+T+SER+WL+NSA+IWE VKNS IIAEYCKTLQ SGMFR+
Sbjct: 365  KLRDQVLSMNCPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQSSGMFRR 419


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  440 bits (1131), Expect = e-121
 Identities = 227/353 (64%), Positives = 274/353 (77%)
 Frame = -1

Query: 1202 SLNLLSDSWDLHADRVLPFLTENTDFTXXXXXXXXXXGKSTILNEIYGSDGSSSGMLPPF 1023
            SLNLLSDSWD H DR LPFLTENTDFT          GKSTILNE+YG DG+S GMLPPF
Sbjct: 57   SLNLLSDSWDFHIDRFLPFLTENTDFTVVGIIGPPGVGKSTILNELYGFDGTSPGMLPPF 116

Query: 1022 MTQSEETRAMAKHCSVGIELRVSSERLILLDTQPIFSPSVLAELMRPDGSSTIALTNGET 843
              QSE+ RAMA+HCSVGIE R+S+ERLILLDTQP+FSPSVLAE+MRPDGSSTI++ +GE 
Sbjct: 117  TVQSEDNRAMARHCSVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLSGEN 176

Query: 842  LSADLAHEMMGIQLGVFLASICHVLLVVSEGAHDINMWHLMLTVDLLKHGIPDPSSLAPS 663
            LS +LAHE+  IQLGV LASICHVLLVVS+G +D +M HLMLTVDLLKHGIPDPSSL  +
Sbjct: 177  LSTELAHELTAIQLGVLLASICHVLLVVSDGVYDDSMRHLMLTVDLLKHGIPDPSSLNSA 236

Query: 662  YSQTPNMGSEKEPKDNMQEAVIEYLAAPVFVHTKLWDEDLSPDKATWMRKRLSHYFSSSS 483
            Y Q+ N G+EKE KD + EA  EY+A P+FVHTKL D+D +P     +RK L+ YFSSSS
Sbjct: 237  YLQSSNAGTEKENKDKVSEAE-EYMATPLFVHTKLQDKDFTPCNFVELRKELAQYFSSSS 295

Query: 482  FKGTKSETTAEEQNDYVEPHVINADNLSSMGMNLVLLPHRNQDDSVTAQYESYVTLIEKL 303
            F   K  +  +EQ  Y  P   + ++  S  +NL ++P +++DDS+ AQY+SY++ + KL
Sbjct: 296  FIKEKGGSMEKEQISYSVPSNSHDNDPDSKSINLFVIPLKDKDDSLKAQYKSYISALWKL 355

Query: 302  RDQVLSMNCRPFAKTVSEREWLKNSARIWETVKNSAIIAEYCKTLQGSGMFRK 144
            RDQVLSMN   FA+TVSER+WLKNSA+IWE VK SAIIAEY + LQGSGMFR+
Sbjct: 356  RDQVLSMNGLSFARTVSERDWLKNSAKIWELVKGSAIIAEYGQALQGSGMFRR 408


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score =  421 bits (1083), Expect = e-115
 Identities = 213/355 (60%), Positives = 265/355 (74%), Gaps = 1/355 (0%)
 Frame = -1

Query: 1205 GSLNLLSDSWDLHADRVLPFLTENTDFTXXXXXXXXXXGKSTILNEIYGSDGSSSGMLPP 1026
            GSLNLLSDSWDLH DR LPFLTENT+F           GKSTI+NEIYG DGSS GMLPP
Sbjct: 60   GSLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPP 119

Query: 1025 FMTQSEETRAMAKHCSVGIELRVSSERLILLDTQPIFSPSVLAELMRPDGSSTIALTNGE 846
            F   SE+ RAMA+HC++GIE R+SSER+ILLDTQP+FSPSVLAE+MRPDGSST+++ NGE
Sbjct: 120  FPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGE 179

Query: 845  TLSADLAHEMMGIQLGVFLASICHVLLVVSEGAHDINMWHLMLTVDLLKHGIPDPSSLAP 666
            + SA+LAHE+M IQLG+ LASIC+++LV+SEG HD+NMWHLMLTVDLLKHG+PDPSS   
Sbjct: 180  SPSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPIS 239

Query: 665  SYSQTPNMGSEKEPKDNMQEAVIEYLAAPVFVHTKLWDEDLSPDKATWMRKRLSHYFSSS 486
            S++Q  N+ SEKE K+    +  EY+A P+FVH K+ D DL P     +++  ++YF +S
Sbjct: 240  SHAQNSNVASEKEYKEKTSTSE-EYMATPIFVHAKVQDRDLVPQNILQLKRAFAYYFKTS 298

Query: 485  SFKGTKSETTAEEQ-NDYVEPHVINADNLSSMGMNLVLLPHRNQDDSVTAQYESYVTLIE 309
            SF G K E    EQ    V P   N D +      L+L+P+RN+DDS   QYES+   + 
Sbjct: 299  SFMGDKFEKVHSEQLLSSVVPDTRNLD-VDGEDRRLLLIPNRNKDDSTRGQYESFNLALW 357

Query: 308  KLRDQVLSMNCRPFAKTVSEREWLKNSARIWETVKNSAIIAEYCKTLQGSGMFRK 144
            KLRDQVLSMN   F +TVSER+WLKNS +IWE+VK+S I+ EY +TLQ SGMFR+
Sbjct: 358  KLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQSSGMFRR 412


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score =  420 bits (1079), Expect = e-115
 Identities = 213/355 (60%), Positives = 263/355 (74%), Gaps = 1/355 (0%)
 Frame = -1

Query: 1205 GSLNLLSDSWDLHADRVLPFLTENTDFTXXXXXXXXXXGKSTILNEIYGSDGSSSGMLPP 1026
            GSLNLLSDSWDLH DR LPFLTENT+F           GKSTI+NEIYG DGSS GMLPP
Sbjct: 60   GSLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPP 119

Query: 1025 FMTQSEETRAMAKHCSVGIELRVSSERLILLDTQPIFSPSVLAELMRPDGSSTIALTNGE 846
            F   SE+ RAMA+HC++GIE R+SSER+ILLDTQP+FSPSVLAE+MRPDGSST+++ NGE
Sbjct: 120  FPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGE 179

Query: 845  TLSADLAHEMMGIQLGVFLASICHVLLVVSEGAHDINMWHLMLTVDLLKHGIPDPSSLAP 666
            + SA+LAHE+M IQLG+ LASIC+++LV+SEG HD+NMWHLMLTVDLLKHG+PDPSS   
Sbjct: 180  SPSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPIS 239

Query: 665  SYSQTPNMGSEKEPKDNMQEAVIEYLAAPVFVHTKLWDEDLSPDKATWMRKRLSHYFSSS 486
            S++Q  N+ SEKE K        EY+A P+FVH K+ D DL P     +++  ++YF +S
Sbjct: 240  SHAQNSNVASEKEYKKTSTSE--EYMATPIFVHAKVQDRDLVPQNILQLKRAFAYYFKTS 297

Query: 485  SFKGTKSETTAEEQ-NDYVEPHVINADNLSSMGMNLVLLPHRNQDDSVTAQYESYVTLIE 309
            SF G K E    EQ    V P   N D +      L+L+P+RN+DDS   QYES+   + 
Sbjct: 298  SFMGDKFEKVHSEQLLSSVVPDTRNLD-VDGEDRRLLLIPNRNKDDSTRGQYESFNLALW 356

Query: 308  KLRDQVLSMNCRPFAKTVSEREWLKNSARIWETVKNSAIIAEYCKTLQGSGMFRK 144
            KLRDQVLSMN   F +TVSER+WLKNS +IWE+VK+S I+ EY +TLQ SGMFR+
Sbjct: 357  KLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQSSGMFRR 411


>ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512184|gb|AES93807.1|
            Protein SMG9 [Medicago truncatula]
          Length = 396

 Score =  409 bits (1052), Expect = e-112
 Identities = 207/353 (58%), Positives = 259/353 (73%)
 Frame = -1

Query: 1202 SLNLLSDSWDLHADRVLPFLTENTDFTXXXXXXXXXXGKSTILNEIYGSDGSSSGMLPPF 1023
            SLNLLSDSWD H DR LPFLTENTDFT          GKS+I+NE+YG D +S GMLPPF
Sbjct: 51   SLNLLSDSWDFHFDRFLPFLTENTDFTVIGVIGSPGVGKSSIMNELYGFDSTSPGMLPPF 110

Query: 1022 MTQSEETRAMAKHCSVGIELRVSSERLILLDTQPIFSPSVLAELMRPDGSSTIALTNGET 843
              QSEE RAMA+HCS GIE R+S+ER+ILLDTQP+FS SVLAE+ RPDGSSTI+L NGE+
Sbjct: 111  TIQSEENRAMARHCSTGIEPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISLLNGES 170

Query: 842  LSADLAHEMMGIQLGVFLASICHVLLVVSEGAHDINMWHLMLTVDLLKHGIPDPSSLAPS 663
            LSA+LAH++MGIQL VFLAS+CH+LLVVSEG HD ++WHLM TVDLLKHGI DPS LA S
Sbjct: 171  LSAELAHDLMGIQLAVFLASVCHILLVVSEGIHDDSLWHLMSTVDLLKHGISDPSLLASS 230

Query: 662  YSQTPNMGSEKEPKDNMQEAVIEYLAAPVFVHTKLWDEDLSPDKATWMRKRLSHYFSSSS 483
             SQ  + G + + K        EY+A PVFVHTKL D++ +P     +RK L  YF  SS
Sbjct: 231  LSQNSSSGHDSDNK----VPEFEYMATPVFVHTKLQDQEFTPKNCLQLRKALMQYFKPSS 286

Query: 482  FKGTKSETTAEEQNDYVEPHVINADNLSSMGMNLVLLPHRNQDDSVTAQYESYVTLIEKL 303
            F G   E T ++ +++V P +++   L S  +NL  +P + ++++  AQ+ESY++ + KL
Sbjct: 287  FVG---ENTGKKPSNHVPPSMVHGSPLDSDTLNLFTIPFKKKEENPRAQHESYISALWKL 343

Query: 302  RDQVLSMNCRPFAKTVSEREWLKNSARIWETVKNSAIIAEYCKTLQGSGMFRK 144
            RDQ+LSM    F + VSEREWLKNSA+IWE VK S  I EYC+TLQ SGM+R+
Sbjct: 344  RDQILSMKSPSFRRPVSEREWLKNSAKIWEQVKKSPTILEYCRTLQHSGMYRR 396


Top