BLASTX nr result
ID: Papaver23_contig00024857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00024857
(577 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29835.3| unnamed protein product [Vitis vinifera] 151 3e-46
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi... 151 3e-46
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ... 147 6e-43
ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi... 139 8e-42
ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea ma... 137 4e-40
>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 151 bits (382), Expect(3) = 3e-46
Identities = 72/96 (75%), Positives = 90/96 (93%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNALIDAYGS+GLLTEAVE+L EME +G+QPN+V+ICTLLAACGRCGQ V++ +VLSA
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSA 504
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
A+ RGI+LNTTAYNSAIGSYLS+GE++KAL+L +++
Sbjct: 505 AELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540
Score = 43.9 bits (102), Expect(3) = 3e-46
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3
Query: 212 ESLSYLKEMKDLKIHFSTEVYSSAICAYSK 123
E+L +L EM DLKI S EVYSS ICAYSK
Sbjct: 567 EALGFLDEMMDLKIPLSKEVYSSVICAYSK 596
Score = 36.2 bits (82), Expect(3) = 3e-46
Identities = 16/25 (64%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = -1
Query: 286 KSMRIKKVKPDSITYNIL-SGYCKI 215
++MR KKVKPD +TYN+L SG CK+
Sbjct: 538 RAMRTKKVKPDPVTYNVLISGCCKM 562
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/96 (35%), Positives = 53/96 (55%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNALI AY S G+ EA V E++ +G P+VV+ +LL A G+ G+ + V
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
+ + N +YN+ I +Y S G +A+ +L +
Sbjct: 435 MRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEM 470
>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 151 bits (382), Expect(3) = 3e-46
Identities = 72/96 (75%), Positives = 90/96 (93%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNALIDAYGS+GLLTEAVE+L EME +G+QPN+V+ICTLLAACGRCGQ V++ +VLSA
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSA 504
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
A+ RGI+LNTTAYNSAIGSYLS+GE++KAL+L +++
Sbjct: 505 AELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540
Score = 43.9 bits (102), Expect(3) = 3e-46
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3
Query: 212 ESLSYLKEMKDLKIHFSTEVYSSAICAYSK 123
E+L +L EM DLKI S EVYSS ICAYSK
Sbjct: 567 EALGFLDEMMDLKIPLSKEVYSSVICAYSK 596
Score = 36.2 bits (82), Expect(3) = 3e-46
Identities = 16/25 (64%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = -1
Query: 286 KSMRIKKVKPDSITYNIL-SGYCKI 215
++MR KKVKPD +TYN+L SG CK+
Sbjct: 538 RAMRTKKVKPDPVTYNVLISGCCKM 562
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/96 (35%), Positives = 53/96 (55%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNALI AY S G+ EA V E++ +G P+VV+ +LL A G+ G+ + V
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
+ + N +YN+ I +Y S G +A+ +L +
Sbjct: 435 MRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEM 470
>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 855
Score = 147 bits (370), Expect(3) = 6e-43
Identities = 70/96 (72%), Positives = 85/96 (88%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNALIDAYGS GLL +A+E+LREME D I PNVV+ICTLLAACGRCGQ V++DTVLSA
Sbjct: 433 VSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSA 492
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
A+ RGI+LNT AYNSAIGSY+++GE++KA+ L S+
Sbjct: 493 AEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSM 528
Score = 41.6 bits (96), Expect(3) = 6e-43
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 212 ESLSYLKEMKDLKIHFSTEVYSSAICAYSK 123
E+LS+++EM LK+ S EVYSS ICAYSK
Sbjct: 555 EALSFMEEMMHLKLPMSKEVYSSIICAYSK 584
Score = 32.0 bits (71), Expect(3) = 6e-43
Identities = 15/24 (62%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -1
Query: 283 SMRIKKVKPDSITYNIL-SGYCKI 215
SMR KK+K DS+TY +L SG CK+
Sbjct: 527 SMRKKKIKSDSVTYTVLISGCCKM 550
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/96 (34%), Positives = 57/96 (59%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNAL+ AY + G+ EA++V E++ +G +P+VV+ +LL A GR + + +
Sbjct: 363 VSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKM 422
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
K ++ N +YN+ I +Y S G E A+ +L+ +
Sbjct: 423 IKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREM 458
>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 139 bits (351), Expect(3) = 8e-42
Identities = 65/96 (67%), Positives = 86/96 (89%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNALIDAYGS GLL +A+++LREME +GIQPNVV+ICTLLAACGRC + V++DTVL+A
Sbjct: 434 VSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTA 493
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
A+ RGI+LNT AYN+AIGS +++GE++KA+ L +S+
Sbjct: 494 AEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSM 529
Score = 43.1 bits (100), Expect(3) = 8e-42
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -3
Query: 212 ESLSYLKEMKDLKIHFSTEVYSSAICAYSKHRLVV 108
E+LS+++E+ LK+ S EVYSSAICAYSK +V
Sbjct: 556 EALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIV 590
Score = 33.9 bits (76), Expect(3) = 8e-42
Identities = 16/25 (64%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -1
Query: 286 KSMRIKKVKPDSITYNIL-SGYCKI 215
KSMR KK+K DS+TY +L SG CK+
Sbjct: 527 KSMRKKKIKTDSVTYTVLISGCCKM 551
Score = 55.1 bits (131), Expect = 8e-06
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNALI AY + G+ EA E++ +G +P++V+ +LL A GR + + +
Sbjct: 364 VSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDR 423
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
K ++ N +YN+ I +Y S G A+ +L+ +
Sbjct: 424 MKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREM 459
>ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein
ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 137 bits (345), Expect(3) = 4e-40
Identities = 65/97 (67%), Positives = 82/97 (84%)
Frame = -2
Query: 570 QVSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLS 391
+VSYNALIDAYGS G+L EA+ +L EME DGIQP+V++I TLL ACGRC Q+ ++D +L+
Sbjct: 435 KVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILA 494
Query: 390 AAKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
AAKSRGI+LNT AYNS IGSYLSLG+++KAL L S+
Sbjct: 495 AAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSM 531
Score = 40.0 bits (92), Expect(3) = 4e-40
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -3
Query: 212 ESLSYLKEMKDLKIHFSTEVYSSAICAYSK 123
ESL + ++M DL IH + EVYSS IC+Y K
Sbjct: 558 ESLKFFEDMLDLNIHLTKEVYSSVICSYVK 587
Score = 33.5 bits (75), Expect(3) = 4e-40
Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -1
Query: 283 SMRIKKVKPDSITYNIL-SGYCKI 215
SMR VKPD++TYNIL SG CK+
Sbjct: 530 SMRAGNVKPDAVTYNILISGSCKL 553
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/96 (35%), Positives = 59/96 (61%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
VSYNAL+ AY S G+ TEA+E + ++ +G++P++V+ +LL A GR Q + V +
Sbjct: 366 VSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNE 425
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
+ + N +YN+ I +Y S G ++A++LL +
Sbjct: 426 MRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Score = 55.5 bits (132), Expect = 6e-06
Identities = 30/96 (31%), Positives = 51/96 (53%)
Frame = -2
Query: 567 VSYNALIDAYGSEGLLTEAVEVLREMEGDGIQPNVVTICTLLAACGRCGQMVRVDTVLSA 388
++Y LI AY +G A ++ +EME +G QP+ + +L+ A + GQ RV ++
Sbjct: 611 LTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEF 670
Query: 387 AKSRGIELNTTAYNSAIGSYLSLGEHEKALTLLQSL 280
K + I+LN AY I S L + + A +++ L
Sbjct: 671 MKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHL 706