BLASTX nr result

ID: Papaver23_contig00024852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024852
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|...   180   9e-44
ref|XP_002320737.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-bi...   169   2e-40
ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|g...   169   3e-40
ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max]             168   5e-40

>ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera]
           gi|296089089|emb|CBI38792.3| unnamed protein product
           [Vitis vinifera]
          Length = 491

 Score =  180 bits (457), Expect = 9e-44
 Identities = 85/102 (83%), Positives = 96/102 (94%)
 Frame = +3

Query: 3   SVRRMLFKNKLKGPAFSIPGGDLERLVKETEGYSGSDLQALCEEAAMMPIRELGSKVQTV 182
           +VRR+L K+KLKG AFS+PGGDLERLV+ETEGYSGSDLQALCEEAAMMPIRELG+ + TV
Sbjct: 390 NVRRLLLKHKLKGQAFSLPGGDLERLVQETEGYSGSDLQALCEEAAMMPIRELGTNILTV 449

Query: 183 KANQIRPLRYGDFKKAMSVIRPSLQKSKWEELEKWNQEFGSN 308
           KANQ+RPLRYGDF+KAM+VIRPSLQK KW+ELE WNQEFGSN
Sbjct: 450 KANQVRPLRYGDFQKAMTVIRPSLQKGKWQELEDWNQEFGSN 491


>ref|XP_002320737.1| predicted protein [Populus trichocarpa] gi|222861510|gb|EEE99052.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/101 (78%), Positives = 94/101 (93%)
 Frame = +3

Query: 3   SVRRMLFKNKLKGPAFSIPGGDLERLVKETEGYSGSDLQALCEEAAMMPIRELGSKVQTV 182
           +VRR+L K+KLKG AFS+PGGDLE+LV+ETEGYSGSDLQALCEEAAMMPIRELG+ + TV
Sbjct: 192 NVRRVLLKHKLKGRAFSLPGGDLEKLVRETEGYSGSDLQALCEEAAMMPIRELGANILTV 251

Query: 183 KANQIRPLRYGDFKKAMSVIRPSLQKSKWEELEKWNQEFGS 305
           KANQ+RPLRY DF+KA++VIRPSL KSKW +LE+WN+EFGS
Sbjct: 252 KANQVRPLRYEDFQKALAVIRPSLSKSKWGDLERWNEEFGS 292


>gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-binding protein [Nicotiana
           tabacum]
          Length = 537

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/102 (77%), Positives = 94/102 (92%)
 Frame = +3

Query: 3   SVRRMLFKNKLKGPAFSIPGGDLERLVKETEGYSGSDLQALCEEAAMMPIRELGSKVQTV 182
           +VRR L K++LKG AFS+PGGDL+RLV++TEGYSGSDLQALCEEAAMMPIRELG+ +  V
Sbjct: 436 NVRRQLLKHRLKGKAFSLPGGDLDRLVRDTEGYSGSDLQALCEEAAMMPIRELGANILRV 495

Query: 183 KANQIRPLRYGDFKKAMSVIRPSLQKSKWEELEKWNQEFGSN 308
            A+Q+R LRYGDF+KAM+VIRPSLQKSKWEELE+WNQEFG+N
Sbjct: 496 DADQVRGLRYGDFQKAMTVIRPSLQKSKWEELERWNQEFGAN 537


>ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|gb|AES79990.1| Spastin
           [Medicago truncatula]
          Length = 486

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/102 (79%), Positives = 92/102 (90%)
 Frame = +3

Query: 3   SVRRMLFKNKLKGPAFSIPGGDLERLVKETEGYSGSDLQALCEEAAMMPIRELGSKVQTV 182
           +VR++L K+KLKG AFS+P  DLE LV+ETEGYSGSDLQALCEEAAMMPIRELGS + TV
Sbjct: 385 NVRKLLLKHKLKGQAFSLPSRDLEMLVRETEGYSGSDLQALCEEAAMMPIRELGSNILTV 444

Query: 183 KANQIRPLRYGDFKKAMSVIRPSLQKSKWEELEKWNQEFGSN 308
           KANQ+R LRY DFKKAM+VIRPSL KSKWEELE+WN+EFGSN
Sbjct: 445 KANQVRGLRYEDFKKAMAVIRPSLNKSKWEELERWNEEFGSN 486


>ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max]
          Length = 491

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/102 (78%), Positives = 92/102 (90%)
 Frame = +3

Query: 3   SVRRMLFKNKLKGPAFSIPGGDLERLVKETEGYSGSDLQALCEEAAMMPIRELGSKVQTV 182
           +VR++L K+KLKG AFS+P  DLERLVKETEGYSGSDLQALCEEAAMMPIRELG+ + TV
Sbjct: 390 NVRKLLLKHKLKGQAFSLPSRDLERLVKETEGYSGSDLQALCEEAAMMPIRELGADILTV 449

Query: 183 KANQIRPLRYGDFKKAMSVIRPSLQKSKWEELEKWNQEFGSN 308
           KANQ+R LRY DFKKAM+ IRPSL KSKWEELE+WN++FGSN
Sbjct: 450 KANQVRGLRYEDFKKAMATIRPSLNKSKWEELERWNEDFGSN 491


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