BLASTX nr result

ID: Papaver23_contig00024841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024841
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    86   4e-15
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002321988.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_003627879.1| F-box/WD-40 repeat-containing protein [Medic...    82   5e-14

>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
 Frame = -3

Query: 443 ILTRLPVKSISRFRCVSKNWYHLFRNPNFIKNHLNHANLMN-----RFNILXXXXXXXXX 279
           ILT LPVKS+ RF+CV K W+ L  +P F+K+HL  A  +N     R  +          
Sbjct: 12  ILTYLPVKSLLRFKCVCKLWHSLISDPKFVKSHLKTAREVNSNKSQRLLLSTRTPQSVDF 71

Query: 278 XXXXXXXXXSHALEIDYPLMSRKCYPR----TLGSSNGLVLIVIIVPYENLCIWNPATRE 111
                    +   E++YP + R C P      +GS +G  LI + V Y  L +WNP+TR+
Sbjct: 72  EAASEGDEDNAVQELEYPDVVR-CSPTYFIGIMGSCDG--LICLFVDYAKLVLWNPSTRD 128

Query: 110 YKRVPEHPAD-SYSVAHGFGFDCKNDDYKVLRIACS 6
           YK +P+   D  +    G G+D  NDDYK +  +C+
Sbjct: 129 YKEMPKPSCDHGFDFFAGIGYDSSNDDYKFVIPSCT 164


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
 Frame = -3

Query: 443 ILTRLPVKSISRFRCVSKNWYHLFRNPNFIKNHLNHANLMNRF-----NILXXXXXXXXX 279
           IL RLPVK + + RCV K+W  L  +P F KNHL+ +    R      N           
Sbjct: 55  ILQRLPVKFLLQLRCVCKSWKSLISHPQFAKNHLHSSPTATRLIAGFTNPAREFILRAYP 114

Query: 278 XXXXXXXXXSHALEIDYPLMSRKCYPRTLGSSNGLVLIVIIVPYENLCIWNPATREYKRV 99
                     +A E+ YP  +RKCY   +GS +G  ++   V      +WNP+  ++K++
Sbjct: 115 LSDVFNAVAVNATELRYPFNNRKCYDFIVGSCDG--ILCFAVDQRRALLWNPSIGKFKKL 172

Query: 98  P----EHPADSYSVAHGFGFDCKNDDYKVLRIAC 9
           P    E    SY++ HGFG+D   D YKV+ I C
Sbjct: 173 PPLDNERRNGSYTI-HGFGYDRFADSYKVVAIFC 205


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
 Frame = -3

Query: 443 ILTRLPVKSISRFRCVSKNWYHLFRNPNFIKNHLNHA---NLMNRFNILXXXXXXXXXXX 273
           IL+RLPVK + RF+CVSK W  L  +P F+KNHL         N + I            
Sbjct: 16  ILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLSTDPHLSIDP 75

Query: 272 XXXXXXXSHAL------EIDYPLMSRKCYPRTLGSSNGLVLIVIIVPYEN--LCIWNPAT 117
                   + L       + YP  S   Y   LGS NGLV  +I   ++N  + IWNP+T
Sbjct: 76  EAYFDADDNLLTTQLKFPVSYPEYS---YIEILGSCNGLVCGLI---HDNPLIYIWNPST 129

Query: 116 REYKRVPEHPADSYSVAHGFGFDCKNDDYKVLRIACS 6
           RE + +    +      +GFG+D K DDYK++R++ S
Sbjct: 130 RESRELAIPGSSEDDAFYGFGYDVKLDDYKIVRVSIS 166


>ref|XP_002321988.1| predicted protein [Populus trichocarpa] gi|222868984|gb|EEF06115.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
 Frame = -3

Query: 443 ILTRLPVKSISRFRCVSKNWYHLFRNPNFIKNHLNHANLMNRFNILXXXXXXXXXXXXXX 264
           IL RLPV+S+ RF+ VSK WY +  + NFI +H  H +    F +L              
Sbjct: 15  ILLRLPVQSLLRFKTVSKLWYDVITSSNFIDSHYQHPSKPKLFVMLTQRRELYSISVLPG 74

Query: 263 XXXXSHALEIDYPLMSRKCYPRTLGSSNGLVLIVIIVPYEN----LCIWNPATREYKRVP 96
                    + + L + K     +GSSNGLV + I     N      +WNPATR+Y+ +P
Sbjct: 75  GINRVDDRSMPFALEAGKYAAEIVGSSNGLVCLSIRSKISNDLNAHILWNPATRQYRELP 134

Query: 95  EHPADSYSVAHGFGFDCKNDDYKVLRIA 12
            +    YS A GFGF    +DYK+L++A
Sbjct: 135 PNRI-CYSQAQGFGFHHGINDYKLLQVA 161


>ref|XP_003627879.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355521901|gb|AET02355.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 471

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
 Frame = -3

Query: 443 ILTRLPVKSISRFRCVSKNWYHLFRNPNFIKNHLNHANLMNRFNILXXXXXXXXXXXXXX 264
           I ++LP+KS++RF C+ K+W  LF NP F+  ++ + N++ +++ L              
Sbjct: 20  IFSKLPLKSLNRFTCLGKSWTLLFENPYFM--NMFYKNIVFKYHSLYDEASLLLNYEWKL 77

Query: 263 XXXXSHALEIDYPL-------MSRKCYPRTLGSS-NGLVLIVIIVPYENLCIWNPATREY 108
                   E    +         R CYP  LGSS NG + I          +WNPAT E 
Sbjct: 78  YFLSGERFENKVQMKWPHPFDQKRGCYPCILGSSINGTLCIYDAHDTSTTVLWNPATEEL 137

Query: 107 KRVPEHPA-----DSYSVAHGFGFDCKNDDYKVLR 18
           K +PE  A     +SY   HGFG+D   DDYKVL+
Sbjct: 138 KIIPEKKAPMYKHESYFTIHGFGYDRVRDDYKVLQ 172


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