BLASTX nr result

ID: Papaver23_contig00024770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024770
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding pro...   102   4e-20
ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding pro...    97   2e-18
ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl...    95   5e-18
ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6...    94   1e-17
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...    94   1e-17

>ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 575

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/61 (86%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
 Frame = +2

Query: 224 LQVGAQTVVELKDKQLRIEDALNATKAAI-EGVVVGGGCCMLRLSQKIDDIKKKLENDEQ 400
           LQVGAQT VELKDKQLRIEDALNATKAAI EGVVVGGGCC+LRLSQK+D IKK LEN+EQ
Sbjct: 379 LQVGAQTQVELKDKQLRIEDALNATKAAIEEGVVVGGGCCLLRLSQKVDGIKKLLENEEQ 438

Query: 401 K 403
           +
Sbjct: 439 Q 439


>ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 646

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
 Frame = +2

Query: 224 LQVGAQTVVELKDKQLRIEDALNATKAAI-EGVVVGGGCCMLRLSQKIDDIKKKLENDEQ 400
           LQVGAQT VELKDKQLR+EDALNATKAAI EGVVVGGGC +LRLSQK+D IKK L+N+EQ
Sbjct: 409 LQVGAQTQVELKDKQLRVEDALNATKAAIEEGVVVGGGCSLLRLSQKVDGIKKLLDNEEQ 468

Query: 401 K 403
           +
Sbjct: 469 Q 469


>ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
           [Cucumis sativus]
          Length = 597

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/60 (81%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
 Frame = +2

Query: 224 LQVGAQTVVELKDKQLRIEDALNATKAAI-EGVVVGGGCCMLRLSQKIDDIKKKLENDEQ 400
           +QVGAQT VELKD+QLRIEDALNA+KAAI EGVVVGGGCC+LRLS K+D IK  LENDEQ
Sbjct: 426 IQVGAQTEVELKDRQLRIEDALNASKAAIEEGVVVGGGCCLLRLSTKVDAIKNVLENDEQ 485


>ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4,
           chloroplastic-like [Cucumis sativus]
          Length = 597

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/60 (81%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
 Frame = +2

Query: 224 LQVGAQTVVELKDKQLRIEDALNATKAAI-EGVVVGGGCCMLRLSQKIDDIKKKLENDEQ 400
           +QVGAQT VELKD+QLRIEDALNA+KAAI EGVVVGGGCC LRLS K+D IK  LENDEQ
Sbjct: 426 IQVGAQTEVELKDRQLRIEDALNASKAAIEEGVVVGGGCCXLRLSTKVDAIKNVLENDEQ 485


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/61 (80%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = +2

Query: 224 LQVGAQTVVELKDKQLRIEDALNATKAAI-EGVVVGGGCCMLRLSQKIDDIKKKLENDEQ 400
           LQVGAQT VELKDKQLRIEDALNATKAAI EGVV+GGGC +LRLS K+D IK+ L+N+EQ
Sbjct: 414 LQVGAQTQVELKDKQLRIEDALNATKAAIEEGVVIGGGCSLLRLSTKVDAIKELLDNEEQ 473

Query: 401 K 403
           K
Sbjct: 474 K 474


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