BLASTX nr result

ID: Papaver23_contig00024729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024729
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   298   5e-79
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...   284   1e-74
ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago ...   278   7e-73
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...   275   4e-72
ref|NP_174603.1| pentatricopeptide repeat-containing protein [Ar...   242   3e-62

>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score =  298 bits (763), Expect = 5e-79
 Identities = 135/193 (69%), Positives = 167/193 (86%)
 Frame = +3

Query: 3   ETAITVFGQMINYGGSVKPDEVTFIGLLNACTHGGLVEEGRKYFKLMTEDYRIEPQIQHY 182
           + AI+VF +M+  G  VKPDEVTFIGLLNACTHGGLVE+G  YF+LMT++Y IEPQI+HY
Sbjct: 378 QNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHY 437

Query: 183 GCIIDLLGRAGQFEEAMEVIKEMRMVPDEVVWGSLLNGCKVYRRMDLAEFAVKKLIEINP 362
           GC++DLLGRAGQFEEAMEV++ MR+ PDEV+WGSLLNGCK++   DLAEF++KKLI+++P
Sbjct: 438 GCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDP 497

Query: 363 DHAGYGVMLANVYGDVGKWDEVGKVRKKLKEMGATKTPGCSWIEIDSQVQQFYSADKTHH 542
           ++ GYG+MLAN+YG++GKWDEV KVRK LKE  A KTPGCSWIEID+QV QFYS DKTH 
Sbjct: 498 NNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHP 557

Query: 543 KTEEIYKMLEVIV 581
           +TEEIY  LE ++
Sbjct: 558 RTEEIYNTLESLI 570


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score =  284 bits (726), Expect = 1e-74
 Identities = 130/195 (66%), Positives = 163/195 (83%)
 Frame = +3

Query: 3   ETAITVFGQMINYGGSVKPDEVTFIGLLNACTHGGLVEEGRKYFKLMTEDYRIEPQIQHY 182
           ++AI +F QM+  GG V+PDEVTF+GLLNACTHGGLVE+G  YF++M ++Y IEPQI+HY
Sbjct: 320 DSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEPQIEHY 379

Query: 183 GCIIDLLGRAGQFEEAMEVIKEMRMVPDEVVWGSLLNGCKVYRRMDLAEFAVKKLIEINP 362
           GC+IDLLGRAG+F+EAM+V+K M M PDEVVWGSLLNGCKV+ R DLAEFA KKLIEI+P
Sbjct: 380 GCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLIEIDP 439

Query: 363 DHAGYGVMLANVYGDVGKWDEVGKVRKKLKEMGATKTPGCSWIEIDSQVQQFYSADKTHH 542
            + GY +MLANVYG++GKWDEV  V + LK+  + K PGCSWIE+D QV QFYS DK++ 
Sbjct: 440 HNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEVDDQVHQFYSLDKSNP 499

Query: 543 KTEEIYKMLEVIVGF 587
           KTE++Y +LE +VGF
Sbjct: 500 KTEDLYIVLESLVGF 514


>ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
           gi|355494601|gb|AES75804.1| hypothetical protein
           MTR_6g059820 [Medicago truncatula]
          Length = 528

 Score =  278 bits (710), Expect = 7e-73
 Identities = 128/194 (65%), Positives = 158/194 (81%)
 Frame = +3

Query: 3   ETAITVFGQMINYGGSVKPDEVTFIGLLNACTHGGLVEEGRKYFKLMTEDYRIEPQIQHY 182
           E AIT F +M+  GG V+PDEVTFIGLLNACTHGGLVE+G  YF++M ++Y IEPQI HY
Sbjct: 326 EDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHY 385

Query: 183 GCIIDLLGRAGQFEEAMEVIKEMRMVPDEVVWGSLLNGCKVYRRMDLAEFAVKKLIEINP 362
           GC+IDLLGRAGQF+EAM+V+K M M PDEVVWGSLLNGCKV+ R DLAEFA KKL+EI+P
Sbjct: 386 GCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDP 445

Query: 363 DHAGYGVMLANVYGDVGKWDEVGKVRKKLKEMGATKTPGCSWIEIDSQVQQFYSADKTHH 542
            + GYG MLAN+YG +GKWDE+  V  KLK+  + K PGCSWIE+D +V QF+S D+++ 
Sbjct: 446 HNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNP 505

Query: 543 KTEEIYKMLEVIVG 584
           KTEE+Y +LE + G
Sbjct: 506 KTEELYNILESLFG 519


>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
           gi|449510706|ref|XP_004163739.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
          Length = 563

 Score =  275 bits (704), Expect = 4e-72
 Identities = 125/194 (64%), Positives = 159/194 (81%)
 Frame = +3

Query: 6   TAITVFGQMINYGGSVKPDEVTFIGLLNACTHGGLVEEGRKYFKLMTEDYRIEPQIQHYG 185
           +AI +F ++I+ G  VKP+EVTF+G+LNACTHGGLVE+G  YF++M  DY IEPQI+H+G
Sbjct: 369 SAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFG 428

Query: 186 CIIDLLGRAGQFEEAMEVIKEMRMVPDEVVWGSLLNGCKVYRRMDLAEFAVKKLIEINPD 365
           C+IDLLGRAG+FEEAMEV++ M + PDEVVWGSLLN CK++ R DLAE++VKKLIE++P 
Sbjct: 429 CLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPK 488

Query: 366 HAGYGVMLANVYGDVGKWDEVGKVRKKLKEMGATKTPGCSWIEIDSQVQQFYSADKTHHK 545
           + GY +MLAN+Y + GKWDEV KVR+ LKE  A KTPGCSWIE+D+QV QFYS D +H  
Sbjct: 489 NGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMSHPS 548

Query: 546 TEEIYKMLEVIVGF 587
            EEIYK LE ++ F
Sbjct: 549 VEEIYKTLESMISF 562


>ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g33350 gi|12322383|gb|AAG51215.1|AC051630_12 unknown
           protein; 15445-13829 [Arabidopsis thaliana]
           gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein,
           putative [Arabidopsis thaliana]
           gi|332193465|gb|AEE31586.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 538

 Score =  242 bits (618), Expect = 3e-62
 Identities = 111/196 (56%), Positives = 148/196 (75%), Gaps = 1/196 (0%)
 Frame = +3

Query: 3   ETAITVFGQMINYG-GSVKPDEVTFIGLLNACTHGGLVEEGRKYFKLMTEDYRIEPQIQH 179
           E AI VF +M+      +KPD +TFIGLLNACTHGGLV +GR YF LMT  + IEP+I+H
Sbjct: 343 EEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEH 402

Query: 180 YGCIIDLLGRAGQFEEAMEVIKEMRMVPDEVVWGSLLNGCKVYRRMDLAEFAVKKLIEIN 359
           YGC+IDLLGRAG+F+EA+EV+  M+M  DE +WGSLLN CK++  +DLAE AVK L+ +N
Sbjct: 403 YGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALN 462

Query: 360 PDHAGYGVMLANVYGDVGKWDEVGKVRKKLKEMGATKTPGCSWIEIDSQVQQFYSADKTH 539
           P++ GY  M+AN+YG++G W+E  + RK +K   A K PG S IEID++V QFYS DK+H
Sbjct: 463 PNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSH 522

Query: 540 HKTEEIYKMLEVIVGF 587
            +TEEIY +L+ ++ F
Sbjct: 523 PETEEIYMILDSLISF 538


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