BLASTX nr result

ID: Papaver23_contig00024687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024687
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    77   7e-12

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 38/106 (35%), Positives = 55/106 (51%)
 Frame = +2

Query: 914  VLYWNLRGFGNEDTKLVFSNHCRKLVPNFVFIAEPWIHFDLIPNNFWLNLNLKLVSLNDR 1093
            +LYW +RG  N DTK+   N      P  +F+AEP I F+ +P  +W ++ +    +N R
Sbjct: 3    ILYWTVRGIDNVDTKIALKNFFNCHKPLLIFVAEPMIAFESVPPWYWDSIGVSKYCVNGR 62

Query: 1094 GSRTPNLWCLCAAHINAIVVSNSVQLITCEATMGDKNYYVTGIYAS 1231
                PNLW L    ++AIV+  S Q I  E +      YV  +YAS
Sbjct: 63   EILQPNLWALWGREVSAIVMFISDQCIALEISCHQSTVYVAAVYAS 108


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