BLASTX nr result

ID: Papaver23_contig00024647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024647
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   178   4e-43
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36

>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/120 (69%), Positives = 98/120 (81%)
 Frame = -2

Query: 369 RAPTWVSSRRLFEQTLMDLPKCSNIKHLKETQAQIMKANLHQDPFVAPKLISAFSICHQM 190
           RAPTWVS+RRLFE+ L DL KC++  H+KE  AQI+K NLH D +VAPKLISAFS+CHQM
Sbjct: 12  RAPTWVSTRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQM 71

Query: 189 PLAVKIFNQIPEPNVHLYNTLMRAFAHNSQYSSAFSTFFDLQENVLFPDNYTYPILLKAC 10
            LAV +FNQI +PNVHLYNTL+RA   NSQ   AF+TFFD+Q+N LF DN+TYP LLKAC
Sbjct: 72  NLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKAC 131


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  158 bits (400), Expect = 4e-37
 Identities = 72/121 (59%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = -2

Query: 369 RAPTWVSSRRLFEQTLMDLPKCSNIKHLKETQAQIMKANLHQDPFVAPKLISAFSICHQM 190
           R PTW S RRL E+ L DL KC+N+  + +  AQ++KANLHQD FVAPKLI+AFS+C  +
Sbjct: 10  RVPTWFSRRRLLEEKLCDLHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHL 69

Query: 189 PLAVKIFNQIPEPNVHLYNTLMRAFAHNSQYSS-AFSTFFDLQENVLFPDNYTYPILLKA 13
             AV +FN +P PNVHLYN+++RA AHNS + S  F+ FF +Q+N LFPDN+TYP LLKA
Sbjct: 70  ASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKA 129

Query: 12  C 10
           C
Sbjct: 130 C 130


>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 561

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/126 (57%), Positives = 93/126 (73%)
 Frame = -2

Query: 387 MCTTSCRAPTWVSSRRLFEQTLMDLPKCSNIKHLKETQAQIMKANLHQDPFVAPKLISAF 208
           MC+   R P+W S+R+L EQ L DL KC+N+  +K+  AQI+K+NLH D FV PKLISAF
Sbjct: 29  MCSVPIRTPSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAF 88

Query: 207 SICHQMPLAVKIFNQIPEPNVHLYNTLMRAFAHNSQYSSAFSTFFDLQENVLFPDNYTYP 28
           S+C QM LA   FNQ+  PNVHLYNT++RA +HNSQ S AF+TFF +Q +  + DN+T+P
Sbjct: 89  SLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFP 148

Query: 27  ILLKAC 10
            LLK C
Sbjct: 149 FLLKVC 154


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/126 (57%), Positives = 93/126 (73%)
 Frame = -2

Query: 387 MCTTSCRAPTWVSSRRLFEQTLMDLPKCSNIKHLKETQAQIMKANLHQDPFVAPKLISAF 208
           MC+   R P+W S+R+L EQ L DL KC+N+  +K+  AQI+K+NLH D FV PKLISAF
Sbjct: 3   MCSVPIRTPSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAF 62

Query: 207 SICHQMPLAVKIFNQIPEPNVHLYNTLMRAFAHNSQYSSAFSTFFDLQENVLFPDNYTYP 28
           S+C QM LA   FNQ+  PNVHLYNT++RA +HNSQ S AF+TFF +Q +  + DN+T+P
Sbjct: 63  SLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFP 122

Query: 27  ILLKAC 10
            LLK C
Sbjct: 123 FLLKVC 128


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/121 (58%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = -2

Query: 369 RAPTWVSSRRLFEQTLMDLPKCSNIKHLKETQAQIMKANLHQDPFVAPKLISAFSICHQM 190
           R PTW S +RL E+ L DL KCSN+  + +  AQ++KANLHQD FVAPKLI+AFS+C  +
Sbjct: 10  RVPTWFSRQRLLEEKLCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHL 69

Query: 189 PLAVKIFNQIPEPNVHLYNTLMRAFAHNSQYSS-AFSTFFDLQENVLFPDNYTYPILLKA 13
             AV +FN +P PNVHLYN+++RA AHN+ + S  F+ FF +Q+N LFPDN+TYP LLKA
Sbjct: 70  ASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKA 129

Query: 12  C 10
           C
Sbjct: 130 C 130


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