BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023984
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   181   1e-43
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   177   1e-42
ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis t...   176   3e-42
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              175   5e-42
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   175   5e-42

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  181 bits (459), Expect = 1e-43
 Identities = 100/190 (52%), Positives = 128/190 (67%)
 Frame = -2

Query: 572 KPNIDIHSRHSQTSNSVPVCGKQLPAVDSPGSEHQQSEKKRTIFTEKNRALKKDLTNKNS 393
           K NI   S+  Q S +     K + A+DS  S   QS+K      +K ++ K  + N++ 
Sbjct: 295 KSNITKKSQSPQASKNNSTGNKPVEALDSSVSTKSQSKKATGSSNKKGKSPK--VANESP 352

Query: 392 DKVSLQQSNSVPGKLEPPIKKLSPLYPPTGKSVVVVESLKKAKIVQGYLGDLFEVLSSNG 213
            K ++     +    + P+KKL   YP +GKSVVVVES+ KAK++QGYLGD++EVL S G
Sbjct: 353 KKQTVHTMGKIKSLEQRPLKKL---YPSSGKSVVVVESVTKAKVIQGYLGDMYEVLPSYG 409

Query: 212 HVRMLARWAGAVRPDDDFSMVWGVPDAAWTQVKSMKVALNGAKNLILASDPSCEGEAIAW 33
           HVR LA  +G+VRPDDDFSMVW VP AAWT +KS+KVAL GA+NLILASDP  EGEAIAW
Sbjct: 410 HVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAENLILASDPDREGEAIAW 469

Query: 32  HLTEMLQQQD 3
           H+ EML QQD
Sbjct: 470 HIIEMLLQQD 479


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223532629|gb|EEF34415.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  177 bits (449), Expect = 1e-42
 Identities = 99/182 (54%), Positives = 121/182 (66%), Gaps = 2/182 (1%)
 Frame = -2

Query: 542 SQTSNSVPVCGKQLPAVDSPGSEHQQSEKKRTIFTEKNRALKKDLTNKNSDKVSLQQSNS 363
           ++TS+S     K    +D+  S   Q  KK    T K +A+K      + DK    Q   
Sbjct: 213 AKTSSSTKTKTKPKELLDASASTKPQPNKKTRKPTGKPKAIKT--VKVSPDK----QQQH 266

Query: 362 VPGKLEPPIKK--LSPLYPPTGKSVVVVESLKKAKIVQGYLGDLFEVLSSNGHVRMLARW 189
            P     P ++  L PLYPPT KSVVVVES+ KAK++QGYLG +FEVL S GHVR LA  
Sbjct: 267 KPMHKSKPFRQGSLKPLYPPTAKSVVVVESVTKAKVIQGYLGPMFEVLPSYGHVRDLAAR 326

Query: 188 AGAVRPDDDFSMVWGVPDAAWTQVKSMKVALNGAKNLILASDPSCEGEAIAWHLTEMLQQ 9
           +G+VRPDDDFSMVW VP  AWT +K++KVALNGA+NL+LASDP  EGEAIAWH+ EMLQQ
Sbjct: 327 SGSVRPDDDFSMVWEVPSPAWTHLKTIKVALNGAENLVLASDPDREGEAIAWHIIEMLQQ 386

Query: 8   QD 3
           QD
Sbjct: 387 QD 388


>ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
           gi|332660478|gb|AEE85878.1| DNA topoisomerase, type IA,
           core [Arabidopsis thaliana]
          Length = 1284

 Score =  176 bits (446), Expect = 3e-42
 Identities = 92/161 (57%), Positives = 117/161 (72%)
 Frame = -2

Query: 488 SPGSEHQQSEKKRTIFTEKNRALKKDLTNKNSDKVSLQQSNSVPGKLEPPIKKLSPLYPP 309
           SP   + +SE++    T+ ++A K+ L       V     NS+  + +   K   PLYPP
Sbjct: 422 SPAPSNSKSEQQHLKSTKASKAPKQKL-------VPQHMKNSIEHRGQNASK---PLYPP 471

Query: 308 TGKSVVVVESLKKAKIVQGYLGDLFEVLSSNGHVRMLARWAGAVRPDDDFSMVWGVPDAA 129
           +GKSV+VVES+ KAKI+QGYLGD++EVL S GH+R LA  +G+VRPDDDFSMVW VP +A
Sbjct: 472 SGKSVIVVESMTKAKIIQGYLGDMYEVLPSYGHIRDLATRSGSVRPDDDFSMVWEVPSSA 531

Query: 128 WTQVKSMKVALNGAKNLILASDPSCEGEAIAWHLTEMLQQQ 6
           WT +KS+KVALNGA+NLILASDP  EGEAIAWH+ EMLQQQ
Sbjct: 532 WTHIKSIKVALNGAENLILASDPDREGEAIAWHIIEMLQQQ 572


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  175 bits (444), Expect = 5e-42
 Identities = 94/169 (55%), Positives = 120/169 (71%)
 Frame = -2

Query: 509 KQLPAVDSPGSEHQQSEKKRTIFTEKNRALKKDLTNKNSDKVSLQQSNSVPGKLEPPIKK 330
           K + A+DS  S   QS+K      +K ++ K  + N++  K ++     +    + P+KK
Sbjct: 30  KPVEALDSSVSTKSQSKKATGSSNKKGKSPK--VANESPKKQTVHTMGKIKSLEQRPLKK 87

Query: 329 LSPLYPPTGKSVVVVESLKKAKIVQGYLGDLFEVLSSNGHVRMLARWAGAVRPDDDFSMV 150
           L   YP +GKSVVVVES+ KAK++QGYLGD++EVL S GHVR LA  +G+VRPDDDFSMV
Sbjct: 88  L---YPSSGKSVVVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAGRSGSVRPDDDFSMV 144

Query: 149 WGVPDAAWTQVKSMKVALNGAKNLILASDPSCEGEAIAWHLTEMLQQQD 3
           W VP AAWT +KS+KVAL GA+NLILASDP  EGEAIAWH+ EML QQD
Sbjct: 145 WEVPSAAWTHLKSIKVALGGAENLILASDPDREGEAIAWHIIEMLLQQD 193


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  175 bits (444), Expect = 5e-42
 Identities = 94/169 (55%), Positives = 120/169 (71%)
 Frame = -2

Query: 509 KQLPAVDSPGSEHQQSEKKRTIFTEKNRALKKDLTNKNSDKVSLQQSNSVPGKLEPPIKK 330
           K + A+DS  S   QS+K      +K ++ K  + N++  K ++     +    + P+KK
Sbjct: 329 KPVEALDSSVSTKSQSKKATGSSNKKGKSPK--VANESPKKQTVHTMGKIKSLEQRPLKK 386

Query: 329 LSPLYPPTGKSVVVVESLKKAKIVQGYLGDLFEVLSSNGHVRMLARWAGAVRPDDDFSMV 150
           L   YP +GKSVVVVES+ KAK++QGYLGD++EVL S GHVR LA  +G+VRPDDDFSMV
Sbjct: 387 L---YPSSGKSVVVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAGRSGSVRPDDDFSMV 443

Query: 149 WGVPDAAWTQVKSMKVALNGAKNLILASDPSCEGEAIAWHLTEMLQQQD 3
           W VP AAWT +KS+KVAL GA+NLILASDP  EGEAIAWH+ EML QQD
Sbjct: 444 WEVPSAAWTHLKSIKVALGGAENLILASDPDREGEAIAWHIIEMLLQQD 492