BLASTX nr result

ID: Papaver23_contig00023739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023739
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   137   9e-31
emb|CBI32318.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group] g...   133   1e-29
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...   132   2e-29
ref|XP_002303939.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29

>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/107 (65%), Positives = 83/107 (77%)
 Frame = -2

Query: 322 MRELQVSLSQTQKVRLQTAIQQLEKFXXXXXXXXXXXXXXXXTIPVNHEEGVLKGHGTSE 143
           MR  Q+SL+QTQK+RLQ A++QLE                   IPVN+E+GVLKGHGT +
Sbjct: 1   MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADT--IPVNYEDGVLKGHGTLD 58

Query: 142 VDGDIVATLCGVVERVNKLVYVRTLRARYKPETGDIIVGRVIEVAPK 2
           +DG++VATLCGVVERVNKLVY+RTLRARYKPETGDIIVGRV E+APK
Sbjct: 59  LDGEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPK 105


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/107 (65%), Positives = 83/107 (77%)
 Frame = -2

Query: 322 MRELQVSLSQTQKVRLQTAIQQLEKFXXXXXXXXXXXXXXXXTIPVNHEEGVLKGHGTSE 143
           MR  Q+SL+QTQK+RLQ A++QLE                   IPVN+E+GVLKGHGT +
Sbjct: 1   MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADT--IPVNYEDGVLKGHGTLD 58

Query: 142 VDGDIVATLCGVVERVNKLVYVRTLRARYKPETGDIIVGRVIEVAPK 2
           +DG++VATLCGVVERVNKLVY+RTLRARYKPETGDIIVGRV E+APK
Sbjct: 59  LDGEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPK 105


>ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group]
           gi|21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza
           sativa Japonica Group] gi|113564903|dbj|BAF15246.1|
           Os04g0520000 [Oryza sativa Japonica Group]
           gi|116310818|emb|CAH67607.1| OSIGBa0145G11.6 [Oryza
           sativa Indica Group] gi|215736890|dbj|BAG95819.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218195230|gb|EEC77657.1| hypothetical protein
           OsI_16671 [Oryza sativa Indica Group]
          Length = 315

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/107 (63%), Positives = 82/107 (76%)
 Frame = -2

Query: 322 MRELQVSLSQTQKVRLQTAIQQLEKFXXXXXXXXXXXXXXXXTIPVNHEEGVLKGHGTSE 143
           MR+LQ+SL+QTQ+VRL+ A+ +L+                   IPVN E+ +LKGHGTS+
Sbjct: 1   MRDLQLSLNQTQRVRLEAALHELQTVAPAAAVTVADT------IPVNDEDNILKGHGTSD 54

Query: 142 VDGDIVATLCGVVERVNKLVYVRTLRARYKPETGDIIVGRVIEVAPK 2
            DG++VATLCGVVERVNKLVYVRTLRARYKPE GDIIVGRVIE+APK
Sbjct: 55  QDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPK 101


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/107 (62%), Positives = 82/107 (76%)
 Frame = -2

Query: 322 MRELQVSLSQTQKVRLQTAIQQLEKFXXXXXXXXXXXXXXXXTIPVNHEEGVLKGHGTSE 143
           MRE+Q+ LSQTQKVRLQ A++QLE                   I VNHE+GVLKGHGT++
Sbjct: 1   MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADS--IHVNHEDGVLKGHGTAD 58

Query: 142 VDGDIVATLCGVVERVNKLVYVRTLRARYKPETGDIIVGRVIEVAPK 2
           ++G++VATLCGVVERVNKLVYVR LR+RYKPE GDI++GRV+EVA K
Sbjct: 59  LNGEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQK 105


>ref|XP_002303939.1| predicted protein [Populus trichocarpa] gi|222841371|gb|EEE78918.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  131 bits (329), Expect = 6e-29
 Identities = 68/107 (63%), Positives = 82/107 (76%)
 Frame = -2

Query: 322 MRELQVSLSQTQKVRLQTAIQQLEKFXXXXXXXXXXXXXXXXTIPVNHEEGVLKGHGTSE 143
           MR +++SL+QTQK+RLQ A++QLE                   IPV++E+ +LKGHGTSE
Sbjct: 1   MRGIEISLNQTQKIRLQRALKQLESLYLRANFNASVTVADT--IPVSNEDTILKGHGTSE 58

Query: 142 VDGDIVATLCGVVERVNKLVYVRTLRARYKPETGDIIVGRVIEVAPK 2
            DG++VATLCGVVERVNKLVYVRTLRARYKPE GDIIVGRV+EVA K
Sbjct: 59  RDGEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIIVGRVVEVAQK 105