BLASTX nr result

ID: Papaver23_contig00023560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023560
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc...    92   4e-36
ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc...    92   4e-36
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...    91   9e-36
ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Bra...    92   9e-36
ref|XP_002306919.1| predicted protein [Populus trichocarpa] gi|2...    91   9e-36

>ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
          Length = 1101

 Score = 92.4 bits (228), Expect(2) = 4e-36
 Identities = 42/64 (65%), Positives = 44/64 (68%)
 Frame = +1

Query: 304 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXXXXXXXXDTSKPNPNKLEYDNLYLDMNGIIH 483
           MGVPAFYRWLAEKYP+                    DTSKPNPNKLE+DNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60

Query: 484 PCFH 495
           PCFH
Sbjct: 61  PCFH 64



 Score = 85.5 bits (210), Expect(2) = 4e-36
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +2

Query: 551 EVFQCMFDYIDRLFVMVRPRKLIYMAIDGVAPRAKMNQQRS 673
           EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRS
Sbjct: 76  EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116


>ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
          Length = 373

 Score = 92.4 bits (228), Expect(2) = 4e-36
 Identities = 42/64 (65%), Positives = 44/64 (68%)
 Frame = +1

Query: 304 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXXXXXXXXDTSKPNPNKLEYDNLYLDMNGIIH 483
           MGVPAFYRWLAEKYP+                    DTSKPNPNKLE+DNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60

Query: 484 PCFH 495
           PCFH
Sbjct: 61  PCFH 64



 Score = 85.5 bits (210), Expect(2) = 4e-36
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +2

Query: 551 EVFQCMFDYIDRLFVMVRPRKLIYMAIDGVAPRAKMNQQRS 673
           EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRS
Sbjct: 76  EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116


>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score = 91.3 bits (225), Expect(2) = 9e-36
 Identities = 41/64 (64%), Positives = 43/64 (67%)
 Frame = +1

Query: 304 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXXXXXXXXDTSKPNPNKLEYDNLYLDMNGIIH 483
           MGVPAFYRWLAEKYP+                    DTSKPNPN +EYDNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 484 PCFH 495
           PCFH
Sbjct: 61  PCFH 64



 Score = 85.5 bits (210), Expect(2) = 9e-36
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +2

Query: 551 EVFQCMFDYIDRLFVMVRPRKLIYMAIDGVAPRAKMNQQRS 673
           EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRS
Sbjct: 76  EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116


>ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
          Length = 1061

 Score = 91.7 bits (226), Expect(2) = 9e-36
 Identities = 42/64 (65%), Positives = 43/64 (67%)
 Frame = +1

Query: 304 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXXXXXXXXDTSKPNPNKLEYDNLYLDMNGIIH 483
           MGVPAFYRWLAEKYPM                    DTSKPNPN LE+DNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60

Query: 484 PCFH 495
           PCFH
Sbjct: 61  PCFH 64



 Score = 85.1 bits (209), Expect(2) = 9e-36
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +2

Query: 551 EVFQCMFDYIDRLFVMVRPRKLIYMAIDGVAPRAKMNQQRS 673
           EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRS
Sbjct: 76  EVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRS 116


>ref|XP_002306919.1| predicted protein [Populus trichocarpa] gi|222856368|gb|EEE93915.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score = 91.3 bits (225), Expect(2) = 9e-36
 Identities = 41/64 (64%), Positives = 43/64 (67%)
 Frame = +1

Query: 304 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXXXXXXXXDTSKPNPNKLEYDNLYLDMNGIIH 483
           MGVPAFYRWLAEKYP+                    DTSKPNPN +EYDNLYLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 484 PCFH 495
           PCFH
Sbjct: 61  PCFH 64



 Score = 85.5 bits (210), Expect(2) = 9e-36
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +2

Query: 551 EVFQCMFDYIDRLFVMVRPRKLIYMAIDGVAPRAKMNQQRS 673
           EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRS
Sbjct: 76  EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116


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