BLASTX nr result

ID: Papaver23_contig00023474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023474
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318867.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
ref|XP_002321854.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_002269624.1| PREDICTED: CDGSH iron-sulfur domain-containi...   132   5e-29
ref|XP_003548239.1| PREDICTED: CDGSH iron-sulfur domain-containi...   129   5e-28
ref|NP_001235168.1| uncharacterized protein LOC100306446 [Glycin...   129   5e-28

>ref|XP_002318867.1| predicted protein [Populus trichocarpa] gi|222859540|gb|EEE97087.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score =  136 bits (342), Expect = 3e-30
 Identities = 70/107 (65%), Positives = 83/107 (77%), Gaps = 2/107 (1%)
 Frame = -1

Query: 489 SMVNVFGARVSYNPSPMKCAMTRSVSTATKVNSVSIRAEA--INPDIRKTEDKVVDAVVV 316
           SM +V  A   Y+ S +   +  +++ A   + V +RAEA  INP+IRKTE+KVVD+V+V
Sbjct: 2   SMASVSSASFCYSKSRIG-GVKPNIAAARPRSLVVVRAEAQAINPEIRKTEEKVVDSVMV 60

Query: 315 TELSKPLTAYCRCWRSGTFPLCDGGHVKHNKATGDNVGPLLLKKPKE 175
            ELSKPLTAYCRCWRSGTFPLCDG HVKHNKATGDNVGPLLLKK KE
Sbjct: 61  AELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQKE 107


>ref|XP_002321854.1| predicted protein [Populus trichocarpa] gi|222868850|gb|EEF05981.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  135 bits (340), Expect = 5e-30
 Identities = 70/125 (56%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
 Frame = -1

Query: 540 ERNIFTSLARQIEVMASSMVNVFGARVSYNPSPMKCAMTRSVSTATKVNS-VSIRAEA-- 370
           +  ++   A ++ +M+ ++ +   A  S+  S  +    +    A +  S V +RAEA  
Sbjct: 44  QETLWERKATRLLIMSMTVASTSTASASFRYSKSRTGGVKPNIAAVRPRSLVVVRAEAQS 103

Query: 369 INPDIRKTEDKVVDAVVVTELSKPLTAYCRCWRSGTFPLCDGGHVKHNKATGDNVGPLLL 190
           INP+IRK E+KVVD+VVV ELSKPLTAYCRCWRSGTFPLCDG HVKHNKATGDNVGPLLL
Sbjct: 104 INPEIRKNEEKVVDSVVVAELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 163

Query: 189 KKPKE 175
           KK KE
Sbjct: 164 KKQKE 168


>ref|XP_002269624.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like
           [Vitis vinifera]
          Length = 117

 Score =  132 bits (331), Expect = 5e-29
 Identities = 70/114 (61%), Positives = 83/114 (72%), Gaps = 14/114 (12%)
 Frame = -1

Query: 483 VNVFGARVSYN--PSPMKCAMT-----RSVSTATKVNS-------VSIRAEAINPDIRKT 346
           V++ GA  SY+  PSP   A+      RS  T   ++S       V +RAE INP+IRK 
Sbjct: 4   VSMVGAGFSYSARPSPSMEALKSGRGGRSFGTQFPISSSGAARRAVVVRAETINPEIRKI 63

Query: 345 EDKVVDAVVVTELSKPLTAYCRCWRSGTFPLCDGGHVKHNKATGDNVGPLLLKK 184
           E+KVVD+V+V EL+KP+TAYCRCWRSGTFPLCDG HVKHNKATGDNVGPLLLKK
Sbjct: 64  EEKVVDSVLVAELAKPVTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 117


>ref|XP_003548239.1| PREDICTED: CDGSH iron-sulfur domain-containing protein 2-like
           [Glycine max]
          Length = 113

 Score =  129 bits (323), Expect = 5e-28
 Identities = 61/71 (85%), Positives = 66/71 (92%), Gaps = 2/71 (2%)
 Frame = -1

Query: 390 VSIRAEA--INPDIRKTEDKVVDAVVVTELSKPLTAYCRCWRSGTFPLCDGGHVKHNKAT 217
           V ++AEA  INPDIRK+E+KVVD+VVVTELSKPLT YCRCWRSGTFPLCDG HVKHNKAT
Sbjct: 43  VLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKHNKAT 102

Query: 216 GDNVGPLLLKK 184
           GDNVGPLLLKK
Sbjct: 103 GDNVGPLLLKK 113


>ref|NP_001235168.1| uncharacterized protein LOC100306446 [Glycine max]
           gi|255628565|gb|ACU14627.1| unknown [Glycine max]
          Length = 113

 Score =  129 bits (323), Expect = 5e-28
 Identities = 61/71 (85%), Positives = 66/71 (92%), Gaps = 2/71 (2%)
 Frame = -1

Query: 390 VSIRAEA--INPDIRKTEDKVVDAVVVTELSKPLTAYCRCWRSGTFPLCDGGHVKHNKAT 217
           V ++AEA  INPDIRK+E+KVVD+VVVTELSKPLT YCRCWRSGTFPLCDG HVKHNKAT
Sbjct: 43  VLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKHNKAT 102

Query: 216 GDNVGPLLLKK 184
           GDNVGPLLLKK
Sbjct: 103 GDNVGPLLLKK 113


Top