BLASTX nr result

ID: Papaver23_contig00023331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023331
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   206   4e-51
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...   204   1e-50
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   201   9e-50
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub...   201   1e-49
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   201   1e-49

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  206 bits (523), Expect = 4e-51
 Identities = 102/132 (77%), Positives = 110/132 (83%)
 Frame = +3

Query: 3    VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
            VDQ+TRQP           FGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGS+L
Sbjct: 1012 VDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSIL 1071

Query: 183  TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
            TT+  Q  KR VRE G  LPPGR PKKVTCHAC+TSKGMETV+MPY+FR+LAAELAAMNI
Sbjct: 1072 TTSIIQPQKRAVREIG-GLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAMNI 1130

Query: 363  KMTLNLTNGAEA 398
            KMTL L+NGA A
Sbjct: 1131 KMTLQLSNGAGA 1142


>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  204 bits (519), Expect = 1e-50
 Identities = 102/132 (77%), Positives = 110/132 (83%)
 Frame = +3

Query: 3    VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
            +DQ+TRQP           FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1043 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 1102

Query: 183  TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
            TTT  Q  KR VRE G  LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1103 TTTFTQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1161

Query: 363  KMTLNLTNGAEA 398
            KMTL L++GA A
Sbjct: 1162 KMTLKLSDGAGA 1173


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  201 bits (511), Expect = 9e-50
 Identities = 100/130 (76%), Positives = 108/130 (83%)
 Frame = +3

Query: 3    VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
            +DQ+TRQP           FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1043 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 1102

Query: 183  TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
             TT  Q  KR VRE G  LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1103 ATTFIQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1161

Query: 363  KMTLNLTNGA 392
            KMTL L++GA
Sbjct: 1162 KMTLKLSDGA 1171


>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 719

 Score =  201 bits (510), Expect = 1e-49
 Identities = 99/130 (76%), Positives = 109/130 (83%)
 Frame = +3

Query: 3   VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
           VDQ+TRQP           FGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGS+L
Sbjct: 590 VDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVL 649

Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
           T++  Q  KR VRE G  LPPG+ PK+VTCHACKTSKGMETVAMPYVF+YLAAELAAMNI
Sbjct: 650 TSSFVQPPKRAVREIG-GLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNI 708

Query: 363 KMTLNLTNGA 392
           KMTL L++GA
Sbjct: 709 KMTLQLSSGA 718


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  201 bits (510), Expect = 1e-49
 Identities = 99/130 (76%), Positives = 109/130 (83%)
 Frame = +3

Query: 3    VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
            VDQ+TRQP           FGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGS+L
Sbjct: 1044 VDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVL 1103

Query: 183  TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
            T++  Q  KR VRE G  LPPG+ PK+VTCHACKTSKGMETVAMPYVF+YLAAELAAMNI
Sbjct: 1104 TSSFVQPPKRAVREIG-GLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNI 1162

Query: 363  KMTLNLTNGA 392
            KMTL L++GA
Sbjct: 1163 KMTLQLSSGA 1172


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