BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023270
         (1557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   167   9e-45
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   159   2e-42
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   143   2e-39
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...   153   1e-38
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   149   1e-38

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold [Medicago truncatula]
          Length = 729

 Score =  167 bits (422), Expect(2) = 9e-45
 Identities = 116/436 (26%), Positives = 198/436 (45%), Gaps = 9/436 (2%)
 Frame = -2

Query: 1370 RMPNKTIQKINQIQRRYWWNKSTPGGYV-CISWNKLCFPKRLGGLGFKNPHLFNXXXXXX 1194
            ++P     +I +IQR + W  S  G     +SW+  C PK  GGLGFK PH  N      
Sbjct: 239  KIPKTICDEIEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKRPHHMNEAFLMK 298

Query: 1193 XXXXXLTEPEAPWVQVLRARYFANKDLLTDVLPTT-GTWIWRSILQGLVIVKQHYIWAIG 1017
                 + +P+  W +VL ++Y  N DL  ++      + +W++I+      K+H IW IG
Sbjct: 299  MLWNLIKQPDKLWCRVLYSKYGRNNDLNNNISSQPYDSPLWKAIVGIWDDFKRHVIWQIG 358

Query: 1016 NGCQIQPWQHHWLT--TSTITPSFQLDQDQPLTLAHFISNNQQWDLAKLQIYFNPATINQ 843
            +G     W   W++  TS  + S Q   D  +++   I+ +  WDL  L    +   +NQ
Sbjct: 359  DGRSTNFWLDKWISNNTSLFSSSTQSYVDTTISVRDAINTSGVWDLNFLMDNLHVDIVNQ 418

Query: 842  IRHIPLVPEAD--DSLQWSLTRTGKFTVSSTYNQLILQHQQGMNLPITFPALFCLKLWHM 669
            I  +P   + D  D++ W  T T KFTV S YN   LQ +    +   +       LW+ 
Sbjct: 419  ILALPTPSDFDGPDTIGWGGTNTLKFTVQSAYN---LQQENPFAVGGDWKT-----LWNW 470

Query: 668  KIPYKLQFFLWKLSHNILPVCNVIYKYSPYKSQMCPMCGMEIESALHLLLKCSFARAVWF 489
            K P+++Q F+W  +H  +       K+    S  CP C  E E+ +H+L  C  +  VW 
Sbjct: 471  KGPHRIQTFIWLAAHGRILTNYRRSKWGVGISPTCPCCAREDETVIHVLRDCVHSTQVWL 530

Query: 488  GVSEYLWYHIFPVTNLQEWLLSWIQKQNPISFWAAHISNLLVVTMWFIWKARCFLVFQAI 309
             +  + +   F   + +EW+ + + K+  I    A      + T W++W  R   +F+  
Sbjct: 531  RLIPHNYITNFFSFDCREWVFNNLNKKG-IGDNPATWQTTFMTTCWYLWNWRNKSIFEIG 589

Query: 308  TPNPISSIRSIYQYCQQFFID---IHIDNHASLNIIRPLHSHIHWLPPPQGWISITVDAS 138
               P +    I ++ ++   +   +H  +H    I      +I W+ PP GW+ +  D +
Sbjct: 590  FQRPSNPTLVIQKFTREIEDNTKLVHKSSHQKETI------YIGWMRPPFGWVKLNCDGA 643

Query: 137  LTKNYNAAGLGLVIRN 90
               +   AG G ++R+
Sbjct: 644  WKGSGTLAGCGGLLRD 659



 Score = 41.6 bits (96), Expect(2) = 9e-45
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = -3

Query: 1549 KYLGIQLFTTRDKLACFASTTDKMQVRLQGWHGKIINQAGRSTQIQAVISTMANFHMNYS 1370
            KYLG  +   R     F    +K+Q +L GW  + ++ AGR T  + VIS++  +HM Y+
Sbjct: 179  KYLGANITPGRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYA 238


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  159 bits (403), Expect(2) = 2e-42
 Identities = 122/468 (26%), Positives = 203/468 (43%), Gaps = 13/468 (2%)
 Frame = -2

Query: 1367 MPNKTIQKINQIQRRYWWNKSTPGGYVC-ISWNKLCFPKRLGGLGFKNPHLFNXXXXXXX 1191
            +P   + +I +  R++ WNK     Y+  +SW+++C P   GGLGF+  H +N       
Sbjct: 813  LPVSVMNEIEKDCRKFLWNKMDKSHYLARMSWDRICSPTGKGGLGFRRLHNWNLAFMAKL 872

Query: 1190 XXXXLTEPEAPWVQVLRARYFANKDLLTDVLPTTGTWIWRSILQGLVIVKQHYIWAIGNG 1011
                + +    WV++L+ARY+     L+ V     + IWR I++G  ++++  +  IGNG
Sbjct: 873  GWMIIKDETKLWVRILKARYWERGSFLSAVGKNHHSPIWRDIVKGRELLEKGLVRRIGNG 932

Query: 1010 CQIQPWQHHWLTTSTITPSFQLDQDQPLTLAHFISNN----QQWDLAKLQIYFNPATINQ 843
                 W H W+    +     +  + P  ++H+  +N     +WD  K+     P  + Q
Sbjct: 933  RSTSLWYHWWVGGGPLVDV--MGSNIPEFMSHWQVSNIIKRGRWDTKKISHLLPPDILKQ 990

Query: 842  IRHIPL--VPEADDSLQWSLTRTGKFTVSSTYNQLILQHQQGMNLPITFPALFCLKLWHM 669
            I+ IPL  + E +D   W+  + G F+V S Y  LI + ++      ++  L     W  
Sbjct: 991  IKEIPLASMSEVEDDFTWNFEKNGTFSVKSAY-YLINRREEETGGKGSWRGL-----WRK 1044

Query: 668  KIPYKLQFFLWKLSHNILPVCNVIYKYSPYKSQMCPMCGMEIESALHLLLKCSFARAVWF 489
             IP+K +  +W   HNILP    + K     +  C  C   IE  +HL   C  A +VW 
Sbjct: 1045 NIPFKYKLLIWNGIHNILPTALFLAKRIHNFNPQCVACDHPIEDMIHLFRDCCVASSVWI 1104

Query: 488  GVSEYLWYHIFPVTNL---QEWLLSWIQ-KQNPISFWAAHISNLLVVTMWFIWKARCFLV 321
               E L +H     NL    EW   WI    N   +W    +       W IW +R   V
Sbjct: 1105 ---EILKHHKPNNQNLFFNLEW-EEWIDFNLNQHDYWVTKFT----TAFWHIWCSRNKTV 1156

Query: 320  FQAITPNPISSIRSIYQYCQQFFIDIHI--DNHASLNIIRPLHSHIHWLPPPQGWISITV 147
            F+    +P  +   +      FF +I     N+   N  + +   + W PP QG++ +  
Sbjct: 1157 FECAVNHPKFTYNRV---VADFFTNIRAFQVNNTQGNGSKVV---LRWKPPHQGFLKLNT 1210

Query: 146  DASLTKNYNAAGLGLVIRNDXXXXXXXXXXXXXARDIDQAEALAVLEG 3
            D +   ++  AG+G V R+              A   + AE +A+ EG
Sbjct: 1211 DGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIREG 1258



 Score = 40.8 bits (94), Expect(2) = 2e-42
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = -3

Query: 1549 KYLGIQLFTTRDKLACFASTTDKMQVRLQGWHGKIINQAGRSTQIQAVISTMANFHMNYS 1370
            KYLG  +   + +   +    +K++  + GW  K +N AGR T I++V+S+   + M  S
Sbjct: 752  KYLGCNILPNKLRRGDYDGLLEKVKSAINGWQAKYLNMAGRCTLIKSVVSSFPVYGMQSS 811

Query: 1369 VCQI 1358
            +  +
Sbjct: 812  LLPV 815


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  143 bits (360), Expect(2) = 2e-39
 Identities = 108/441 (24%), Positives = 189/441 (42%), Gaps = 15/441 (3%)
 Frame = -2

Query: 1367 MPNKTIQKINQIQRRYWWNKSTPGGYVC-ISWNKLCFPKRLGGLGFKNPHLFNXXXXXXX 1191
            +P   I  I ++ R ++W +      V  ++W KL  PK+ GGLG +N  +FN       
Sbjct: 819  IPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQ 878

Query: 1190 XXXXLTEPEAPWVQVLRARYFANKDLLTDVLPTTGTWIWRSILQGLVIVKQHYIWAIGNG 1011
                LT+P++   +V++ +YF   + L   +    ++  +SIL    ++++     IG+G
Sbjct: 879  AWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSILSARAVIQKGMCRVIGDG 938

Query: 1010 CQIQPWQHHWLTT----STITPSFQLDQDQPLTLAHFISNNQQWDLAKLQIYFNPATINQ 843
                 W   W+ +    S        + D P  +   ISN+ +W++  L   F P     
Sbjct: 939  RDTTIWGDPWVPSLERYSIAATEGVSEDDGPQKVCELISND-RWNVELLNTLFQPWESTA 997

Query: 842  IRHIPL-VPEADDSLQWSLTRTGKFTVSSTYNQLILQHQQGMNLPITFPAL-FCLKLWHM 669
            I+ IP+ + +  D   W +++ G+FTV S Y   +L+ ++        P L    K+W  
Sbjct: 998  IQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKA 1057

Query: 668  KIPYKLQFFLWKLSHNILPVCNVIYKYSPYKSQMCPMCGMEIESALHLLLKCSFARAVWF 489
            KIP K++ F WK  HN L V   + K        CP CG + E+  HL+  C  +   W+
Sbjct: 1058 KIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWY 1117

Query: 488  GVSEYLWYHIFPVTNLQEWLLSWIQKQNPISFWAAHISNLLVVTMWFIWKAR-------C 330
                 +        + + W+ S +       +WA     L  +  W IW  R        
Sbjct: 1118 ISPLRIHTGNIEAGSFRIWVESLLDTHKDTEWWA-----LFWMICWNIWLGRNKWVFEKK 1172

Query: 329  FLVFQAITPNPISSIRSIYQYCQQFFIDIHIDNHASLNIIRPLHSHIH-WLPPPQGWISI 153
             L FQ +    +  +    + C            A  + +  L++H + W  PP G + +
Sbjct: 1173 KLAFQEVVERAVRGVMEFEEEC------------AHTSPVETLNTHENGWSVPPVGMVKL 1220

Query: 152  TVDASLTKNYNAAGLGLVIRN 90
             VDA++ K+    G+G V+R+
Sbjct: 1221 NVDAAVFKHV-GIGMGGVVRD 1240



 Score = 47.4 bits (111), Expect(2) = 2e-39
 Identities = 22/58 (37%), Positives = 33/58 (56%)
 Frame = -3

Query: 1552 EKYLGIQLFTTRDKLACFASTTDKMQVRLQGWHGKIINQAGRSTQIQAVISTMANFHM 1379
            EKYLG+  F    K   F +  D++  +L+GW GK ++QAGR   I+AV   +  + M
Sbjct: 757  EKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAM 814


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  153 bits (387), Expect(2) = 1e-38
 Identities = 112/443 (25%), Positives = 197/443 (44%), Gaps = 14/443 (3%)
 Frame = -2

Query: 1376 LLRMPNKTIQKINQIQRRYWWNKSTPGGYV-CISWNKLCFPKRLGGLGFKNPHLFNXXXX 1200
            + R+P K    I++   R+WW        +   +W ++C PK+ GGLGF++ + FN    
Sbjct: 625  VFRIPKKICDCISEAIARFWWGDDENHRRIHWKAWWRMCIPKQRGGLGFRDLYCFNRAML 684

Query: 1199 XXXXXXXLTEPEAPWVQVLRARYFANKDLLTDVLPTTGTWIWRSILQGLVIVKQHYIWAI 1020
                   L +P++   +V+R +Y+ + ++L        ++ W+SIL G    K  YIW I
Sbjct: 685  AKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSSYAWQSILSGSECFK-GYIWRI 743

Query: 1019 GNGCQIQPWQHHWLTTST----ITPSFQLDQDQPLTLAHFISNNQQWDLAKLQIYFNPAT 852
            G+G Q+  W+   + +S+    +TP  +    +   L + +S    WD   +   F P  
Sbjct: 744  GDGSQVNIWEDSLIPSSSNGKVLTPRGRNIITKVEELINPVSGG--WDEDLIDTLFWPID 801

Query: 851  INQIRHIPLVPEADDSLQWSLTRTGKFTVSSTYN-QLILQHQQGMNLP---ITFPALFCL 684
             N+I  IP+    +D + W  TR+G F+V S Y+ Q   +      LP    +       
Sbjct: 802  ANRILQIPISAGREDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKERLPDGASSSSRPVWD 861

Query: 683  KLWHMKIPYKLQFFLWKLSHNILPVCNVIYKYSPYKSQMCPMCGMEIESALHLLLKCSFA 504
             LW ++IP K++ F W++ H ++P   ++          CP+C   +E   H++  C  A
Sbjct: 862  NLWKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRA 921

Query: 503  RAVWFGVSEYLWYHIFPVTNLQE----WLLSWIQKQNPISFW-AAHISNLLVVTMWFIWK 339
            + +W  +   +W  I P+          +   I+K   +S   A  ++ L++   W+IW 
Sbjct: 922  KLIWKQLG--IWSRIQPILGFDRSGSVLVEEMIRKGGKVSHLNAIGMTELILTGAWYIWW 979

Query: 338  ARCFLVFQAITPNPISSIRSIYQYCQQFFIDIHIDNHASLNIIRPLHSHIHWLPPPQGWI 159
             R  LV      NP  S  SI      + +          N          W  PP+G +
Sbjct: 980  ERRQLVQGERIQNPARSAMSIATLTTNYMLSNKKGKTKIQN---------GWKKPPEGML 1030

Query: 158  SITVDASLTKNYNAAGLGLVIRN 90
             I VDA+   +  + G+G+V+R+
Sbjct: 1031 MINVDAAFDFDSGSGGIGVVLRD 1053



 Score = 34.7 bits (78), Expect(2) = 1e-38
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -3

Query: 1552 EKYLGIQLFTTRDKLACFASTTDKMQVRLQGWHGKIINQAGRSTQIQAVISTMANFHMN 1376
            +KYLG+      DK  CF    D++  R+ G   K+++  G+   I+++   +  F M+
Sbjct: 566  DKYLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIAQAIPVFAMS 624


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  149 bits (376), Expect(2) = 1e-38
 Identities = 111/400 (27%), Positives = 182/400 (45%), Gaps = 14/400 (3%)
 Frame = -2

Query: 1370 RMPNKTIQKINQIQRRYWWNKSTPG-GYVCISWNKLCFPKRLGGLGFKNPHLFNXXXXXX 1194
            R+P     K+     ++WW+ +    G   ++W+KLC  K  GGLGF+N   FN      
Sbjct: 593  RLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAK 652

Query: 1193 XXXXXLTEPEAPWVQVLRARYFANKDLLTDVLPTTGTWIWRSILQGLVIVKQHYIWAIGN 1014
                 +T P++ + +V + RYF   + L  +   + ++ WRS++    +V +  I  +G+
Sbjct: 653  QLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGS 712

Query: 1013 GCQIQPWQHHWLTTSTITPSFQLDQ--DQPLTLAHFI-SNNQQWDLAKLQIYFNPATINQ 843
            G  I  W   W+      P+       D  L +   I S +  W++  L+  F+P  +  
Sbjct: 713  GASISVWNDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPL 772

Query: 842  IRHIPL-VPEADDSLQWSLTRTGKFTVSSTYNQLILQHQQGMNLPITFPALFCLK--LWH 672
            I  +P+  P  +D+L W  T+ G +TV S Y+   L   +G  L    P L  LK  +W 
Sbjct: 773  ISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTL--IGPDLTTLKAYIWK 830

Query: 671  MKIPYKLQFFLWKLSHNILPVCNVIYKYSPYKSQMCPMCGMEIESALHLLLKCSFARAVW 492
            ++ P KL+ FLW++    +PV   + K      + C  CG   ES  H L +C  AR +W
Sbjct: 831  VQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIW 890

Query: 491  FGVSEYLWYHIFP----VTNLQEWLLSWIQKQNPISFWAAHISNLLVVTMWFIWKARCFL 324
                      IFP     TNL    L W   + P    +A    ++    W+IWKAR   
Sbjct: 891  ALSQIPTAPGIFPSNSIFTNLDH--LFW---RIPSGVDSAPYPWII----WYIWKARNEK 941

Query: 323  VFQAITPNPISSIRSIY---QYCQQFFIDIHIDNHASLNI 213
            VF+ +  +P+  +       Q  Q+  +++H + H SL+I
Sbjct: 942  VFENVDKDPMEILLLAVKEAQSWQEAQVELHSERHGSLSI 981



 Score = 38.9 bits (89), Expect(2) = 1e-38
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = -3

Query: 1546 YLGIQLFTTRDKLACFASTTDKMQVRLQGWHGKIINQAGRSTQIQAVISTMANFHMN 1376
            YLG+       K   F+   D++Q R+ GW  K +++ G+   I++V +T+  + M+
Sbjct: 534  YLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMS 590