BLASTX nr result

ID: Papaver23_contig00023258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023258
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphat...    71   4e-10
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    68   2e-09
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...    68   2e-09
emb|CBI35661.3| unnamed protein product [Vitis vinifera]               66   1e-08
ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arab...    59   1e-06

>ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula] gi|355496659|gb|AES77862.1| RNA
           polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula]
          Length = 1213

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
 Frame = -3

Query: 644 VWTMEDLFKYNQVFPRNFATPMYNYAWKQAVQNRPLR-----------NVNDDNAAAATS 498
           VW ++DL+       R +A+ +YN AW QAVQN+PL            N N +N+     
Sbjct: 80  VWAVQDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDKNANANSNNSGNKDG 139

Query: 497 VVIEISDEGVVVNDVDSXXXXXXXXXXXXXXXXXEMVEGTVVESNLNGMPSSTTDDKIM- 321
            + + S E VVV+D D                     EG + E  ++G      DD ++ 
Sbjct: 140 ELNKSSKEIVVVDDDDEKE------------------EGELEEGEIDG---DADDDCVIV 178

Query: 320 ----NENEEIKSIRQVIQLVINAKNAGK*VHSLLS-YG*INSEDFDYTVLNNGTSSSVNS 156
                 N E+  +R V++ V  A  A     +     G + S+     V +   S+  + 
Sbjct: 179 GSENFSNSEVLGVRGVLEGVTVASVAESFAETCRRIQGTLQSK-----VFSGFDSAEKDD 233

Query: 155 LIQQSFAALQAVKSVYCTMNFKEQTQYKDVFSRLLVHVKTQNASLFTAEQM 3
           L++  F A++ V SV+C M+  ++ + KD  SRLL  +K Q+  LFT E M
Sbjct: 234 LVRLLFNAVEVVYSVFCCMDNLQKEENKDNISRLLSFLKNQH--LFTMEHM 282


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 31/254 (12%)
 Frame = -3

Query: 671 VIREESKRM---VWTM---EDLFKYNQVFPRNFATPMYNYAWKQAVQNRPLRNV---NDD 519
           V+RE   +    VWTM   +DL+KY+Q     +   +YN AW QAVQN+PL ++   +D+
Sbjct: 41  VLREAKPKADTRVWTMRDLQDLYKYHQACS-GYTPRLYNLAWAQAVQNKPLNDIFVMDDE 99

Query: 518 NAAAATSVVIEISDEGVVVNDV------DSXXXXXXXXXXXXXXXXXEMVEGTVVESNLN 357
            +  ++S      D+     +V      DS                 E+ EG   E +L+
Sbjct: 100 ESKRSSSSSNTSRDDSSSAKEVAKVIIDDSGDEMDVKMDDVSEKEEGELEEG---EIDLD 156

Query: 356 GMPSSTTDDKIMNENE------------EIKSIRQVIQ--LVINAKNAGK*VHSLL--SY 225
             P    +  +++ NE             +KSI++ ++   VI A+ +   V S L  + 
Sbjct: 157 SEPDVKDEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTL 216

Query: 224 G*INSEDFDYTVLNNGTSSSVNSLIQQSFAALQAVKSVYCTMNFKEQTQYKDVFSRLLVH 45
           G +    F   V+   +  + ++L QQ   A++A+  V+C+MN  ++   KDVFSRLL  
Sbjct: 217 GSLQKV-FGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSC 275

Query: 44  VKTQNASLFTAEQM 3
           V+  ++ +F+ + +
Sbjct: 276 VECGDSPIFSIQHI 289


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 11/225 (4%)
 Frame = -3

Query: 644 VWTMEDLFKYNQVFPRNFATPMYNYAWKQAVQNRPLRN---VNDDNAAAATSVVIEISDE 474
           VWTM D++KY     R++A  +YN AW QAVQN+PL     +  DN+          + E
Sbjct: 61  VWTMRDVYKYP--ISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA------NGE 112

Query: 473 GVVVNDVDSXXXXXXXXXXXXXXXXXEMVEGTVVESNLNGMPSSTTDDKIMNENEEIKSI 294
             V+ DVD                     EG + E  ++      + D ++N  +E   I
Sbjct: 113 SKVIIDVD--------------VDDDAKEEGELEEGEID----LDSADLVVNFGKEANFI 154

Query: 293 RQVIQLVINAKN-------AGK*VHSLLSYG*INSEDFDYTVLNNGTSSSVNSLIQQSF- 138
           R+ +Q V   +          K   SLL+ G +              S   N ++ Q F 
Sbjct: 155 REQLQSVTLDETHKSFSMVCSKLQTSLLALGEL------------ALSQDKNDILIQLFM 202

Query: 137 AALQAVKSVYCTMNFKEQTQYKDVFSRLLVHVKTQNASLFTAEQM 3
            AL+ + SV+ +MN  ++ Q  D+ SRLL + KTQ  +L ++EQ+
Sbjct: 203 TALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQL 247


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 20/243 (8%)
 Frame = -3

Query: 671 VIREESKRM---VWTM---EDLFKYNQVFPRNFATPMYNYAWKQAVQNRPLRNVN---DD 519
           V+RE   +    VWTM   +DL+KY+Q     +   +YN AW QAVQN+PL ++    DD
Sbjct: 81  VLREAKPKADTRVWTMRDLQDLYKYHQACS-GYTPRLYNLAWAQAVQNKPLNDIFVIIDD 139

Query: 518 NAAAATSVVIEISD-------EGVVVNDVDSXXXXXXXXXXXXXXXXXEMVEGTVVESNL 360
           +       + ++S+       EG +  D+DS                    EG V++ N 
Sbjct: 140 SGDEMDVKMDDVSEKEEGELEEGEI--DLDSEPDVKD--------------EGGVLDVN- 182

Query: 359 NGMPSSTTDDKIMNENEEIKSIRQVIQ--LVINAKNAGK*VHSLL--SYG*INSEDFDYT 192
                   D K     E +KSI++ ++   VI A+ +   V S L  + G +    F   
Sbjct: 183 ----EPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKV-FGEK 237

Query: 191 VLNNGTSSSVNSLIQQSFAALQAVKSVYCTMNFKEQTQYKDVFSRLLVHVKTQNASLFTA 12
           V+   +  + ++L QQ   A++A+  V+C+MN  ++   KDVFSRLL  V+  ++ +F+ 
Sbjct: 238 VVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSI 297

Query: 11  EQM 3
           + +
Sbjct: 298 QHI 300


>ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arabidopsis lyrata subsp.
           lyrata] gi|297327126|gb|EFH57546.1| hypothetical protein
           ARALYDRAFT_482300 [Arabidopsis lyrata subsp. lyrata]
          Length = 1248

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 7/220 (3%)
 Frame = -3

Query: 644 VWTMEDLFKYNQVFPRNFATPMYNYAWKQAVQNRPLRN--VNDDNAAAATSVVIEISDEG 471
           VWTMEDL      +     + + N+AW QAVQN+ L    V D     +  +VIE S + 
Sbjct: 76  VWTMEDLLTKYPGYRLYATSGLSNFAWSQAVQNKSLNEGLVMDYEPRESDKIVIEDSGDE 135

Query: 470 VVVNDVDSXXXXXXXXXXXXXXXXXEMVEGTVVESNLNGMPSSTTDDKIMNE---NEEIK 300
               +++                     E    ES +        DD+I  E    +++K
Sbjct: 136 KEEGELEEGEIDLVENASDDNLVASVDKE---TESVVLISADKVEDDRIQKEIDLEKKVK 192

Query: 299 SIRQVIQL--VINAKNAGK*VHSLLSYG*INSEDFDYTVLNNGTSSSVNSLIQQSFAALQ 126
            IR V++   ++ A+   + V S +       E     V +N      ++L+Q SFA+LQ
Sbjct: 193 LIRGVLESTSLVEAQTGFEGVCSRILGA---LESLRELVSDNDDFPKRDTLVQLSFASLQ 249

Query: 125 AVKSVYCTMNFKEQTQYKDVFSRLLVHVKTQNASLFTAEQ 6
            + SV+C++N   + + K+  SRLL  V    +   ++ Q
Sbjct: 250 TINSVFCSLNNVSKERNKETMSRLLTLVNDHFSRFLSSNQ 289


Top