BLASTX nr result

ID: Papaver23_contig00023177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023177
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    57   1e-06
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...    57   1e-06

>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
            predicted protein [Populus trichocarpa]
          Length = 1019

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/43 (53%), Positives = 34/43 (79%)
 Frame = +1

Query: 1    KANEKERKRDEEKHAYTPDSDSEGEHRRHRKDHRDGSRRNGTH 129
            + +  +RK+   KH YTP+SD E +H+RH++DHRDGSRRNG++
Sbjct: 953  RKHSSDRKKSR-KHTYTPESDGESQHKRHKRDHRDGSRRNGSN 994


>ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein
           40A-like, partial [Cucumis sativus]
          Length = 803

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +1

Query: 22  KRDEEKHAYTPDSDSEGEHRRHRKDHRDGSRRN 120
           ++   KHAY+P+SDSE  HRRH++DHRDGSRRN
Sbjct: 755 RKKSRKHAYSPESDSENRHRRHKRDHRDGSRRN 787


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +1

Query: 22   KRDEEKHAYTPDSDSEGEHRRHRKDHRDGSRRN 120
            ++   KHAY+P+SDSE  HRRH++DHRDGSRRN
Sbjct: 937  RKKSRKHAYSPESDSENRHRRHKRDHRDGSRRN 969


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