BLASTX nr result

ID: Papaver23_contig00023001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023001
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330007.1| global transcription factor group [Populus t...   142   6e-32
ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens ...   139   3e-31
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   138   6e-31
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   138   8e-31
ref|XP_002318930.1| global transcription factor group [Populus t...   137   1e-30

>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score =  142 bits (357), Expect = 6e-32
 Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 12/211 (5%)
 Frame = +3

Query: 6    GRQGKTVTGTLDAHANGFRYKNYIIPFELDIMFHNISFAFFQDGDEKMAPLFHLHLHNPI 185
            G +G+ + G+L+AH NGFRY        +DIMF NI  AFFQ  +++M  L H HLHN I
Sbjct: 687  GGRGRKLPGSLEAHVNGFRYSTSRAEERVDIMFANIKHAFFQPAEKEMITLLHFHLHNHI 746

Query: 186  LVGTEMTKDMQF-----RMVQTNDGRNMRRLLRDTDELKEDSQKGNTNSEV---IRKFLS 341
            +VG + TKD+QF      +VQT  G   +R   D DE++E+ ++    +++    + F++
Sbjct: 747  MVGNKKTKDVQFYVEVMDVVQTLGGG--KRSAYDPDEIEEEQRERERKNKINMDFQSFVN 804

Query: 342  RVDSIC----FRSNSLEFEEVNKRHGFYGELSQLTLKGHLTLPSFFVFTFSCIVQLEHMP 509
            RV+ +     F    LEF++  +  GF+G   ++T        SF V T SC+V+L   P
Sbjct: 805  RVNDLWAQPQFSGLDLEFDQPLRELGFHGVPHKVT--------SFIVPTSSCLVELVETP 856

Query: 510  FTVVILSEIEIVNLVHVGSGMEMFNMTIVFK 602
            F VV LSEIEIVNL  VG G + F+MTIVFK
Sbjct: 857  FLVVTLSEIEIVNLERVGLGQKNFDMTIVFK 887


>ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens subsp. patens]
            gi|162664770|gb|EDQ51477.1| FACT complex subunit
            [Physcomitrella patens subsp. patens]
          Length = 1065

 Score =  139 bits (351), Expect = 3e-31
 Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
 Frame = +3

Query: 6    GRQGKTVTGTLDAHANGFRYKNYIIPFELDIMFHNISFAFFQDGDEKMAPLFHLHLHNPI 185
            G +G+ ++GTL+AH NGFRY       ++DIM+ NI  AFFQ  +++M  L H HLHN I
Sbjct: 685  GGRGRKMSGTLEAHTNGFRYSTMRQEEKVDIMYRNIKHAFFQPAEKEMITLVHFHLHNYI 744

Query: 186  LVGTEMTKDMQF-----RMVQTNDGRNMRRLLRDTDELKEDSQKGNTNSEVIRKFLSRV- 347
            +VGT+ TKD+QF      +VQT  G   RR + D DE++E+ Q+ +  +++ ++F + V 
Sbjct: 745  MVGTKKTKDVQFYVEVMEVVQTLGG--SRRSMMDPDEIEEEQQERDRRNKINKEFEAFVK 802

Query: 348  ------DSICFRSNSLEFEEVNKRHGFYGELSQLTLKGHLTLPSFFVFTFSCIVQLEHMP 509
                  D   +R   LEF+   +  GF+G  ++ +        +F V T +C+V+L   P
Sbjct: 803  RMAELWDQPPWRELDLEFDIPFRELGFHGVPNKSS--------AFIVPTVNCLVELIETP 854

Query: 510  FTVVILSEIEIVNLVHVGSGMEMFNMTIVFK 602
            F VV L++IEIVNL  VG G + F+M IVFK
Sbjct: 855  FLVVSLNDIEIVNLERVGLGQKAFDMAIVFK 885


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  138 bits (348), Expect = 6e-31
 Identities = 83/211 (39%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
 Frame = +3

Query: 6    GRQGKTVTGTLDAHANGFRYKNYIIPFELDIMFHNISFAFFQDGDEKMAPLFHLHLHNPI 185
            G +G+ +TG+L++H NGFRY        +DIM+ NI  AFFQ  +++M  L H HLHN I
Sbjct: 691  GGRGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHI 750

Query: 186  LVGTEMTKDMQF-----RMVQTNDGRNMRRLLRDTDELKEDSQKGNTNSEV---IRKFLS 341
            +VG + TKD+QF      +VQT  G   +R   D DE++E+ ++ +  +++    + F++
Sbjct: 751  MVGNKKTKDVQFFVEVMDVVQTLGGG--KRSAYDPDEIEEEQRERDRKNKINMDFQNFVN 808

Query: 342  RVDSIC----FRSNSLEFEEVNKRHGFYGELSQLTLKGHLTLPSFFVFTFSCIVQLEHMP 509
            RV+ +     F+   LEF++  +  GF+G   + +        +F V T SC+V+L   P
Sbjct: 809  RVNDLWGQPQFKGLDLEFDQPLRELGFHGVPHKAS--------AFIVPTSSCLVELIETP 860

Query: 510  FTVVILSEIEIVNLVHVGSGMEMFNMTIVFK 602
            F V+ LSEIEIVNL  VG G + F+MTIVFK
Sbjct: 861  FLVITLSEIEIVNLERVGLGQKNFDMTIVFK 891


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score =  138 bits (347), Expect = 8e-31
 Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 12/211 (5%)
 Frame = +3

Query: 6    GRQGKTVTGTLDAHANGFRYKNYIIPFELDIMFHNISFAFFQDGDEKMAPLFHLHLHNPI 185
            G +G+ +TG+L+AH NG RY        +D+M+ NI  AFFQ  D++M  L H HLHN I
Sbjct: 688  GGRGRKLTGSLEAHVNGLRYSTSRPDERIDVMYSNIKHAFFQPADKEMITLLHFHLHNHI 747

Query: 186  LVGTEMTKDMQF-----RMVQTNDGRNMRRLLRDTDELKEDSQKGNTNSEV---IRKFLS 341
            +VG + TKD+QF      +VQT  G   +R   D DE++E+ ++ +  +++    + F++
Sbjct: 748  MVGNKKTKDVQFFIEVMDIVQTLGGG--KRSAYDPDEIEEEQRERDRKNKINMDFQNFVN 805

Query: 342  RVDSIC----FRSNSLEFEEVNKRHGFYGELSQLTLKGHLTLPSFFVFTFSCIVQLEHMP 509
            RV+ +     FR   LEF++  +  GF+G   + +        +F V T SC+V+L   P
Sbjct: 806  RVNDVWGQPQFRGLDLEFDQPLRELGFHGVPHKAS--------AFIVPTSSCLVELIETP 857

Query: 510  FTVVILSEIEIVNLVHVGSGMEMFNMTIVFK 602
              V+ LSEIEIVNL  +G G + F+MTIVFK
Sbjct: 858  VVVITLSEIEIVNLERIGLGQKNFDMTIVFK 888


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score =  137 bits (345), Expect = 1e-30
 Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 12/209 (5%)
 Frame = +3

Query: 12   QGKTVTGTLDAHANGFRYKNYIIPFELDIMFHNISFAFFQDGDEKMAPLFHLHLHNPILV 191
            +G+ + G L+AH NGFR+        +DIMF NI  AFFQ  +++M  L H HLHN I+V
Sbjct: 689  RGRKLPGALEAHVNGFRFSTSRSEERVDIMFSNIKHAFFQPAEKEMITLLHFHLHNHIMV 748

Query: 192  GTEMTKDMQF-----RMVQTNDGRNMRRLLRDTDELKEDSQKGNTNSEV---IRKFLSRV 347
            G + TKD+QF      +VQT  G   +R   D DE++E+ ++ +  +++    + F++RV
Sbjct: 749  GNKKTKDVQFYVEVMDVVQTLGGG--KRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRV 806

Query: 348  DSIC----FRSNSLEFEEVNKRHGFYGELSQLTLKGHLTLPSFFVFTFSCIVQLEHMPFT 515
            + +     F    LEF++  +  GF+G   ++T        SF V T SC+V+L   PF 
Sbjct: 807  NDLWSQPQFSGLDLEFDQPLRELGFHGVPHKVT--------SFIVPTSSCLVELVETPFL 858

Query: 516  VVILSEIEIVNLVHVGSGMEMFNMTIVFK 602
            VV L EIEIVNL  VG G + F+MTIVFK
Sbjct: 859  VVTLGEIEIVNLERVGLGQKNFDMTIVFK 887


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