BLASTX nr result

ID: Papaver23_contig00022417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022417
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189288.1| ATP-dependent RNA helicase DHX8/PRP22 [Arabidop...   383   e-104
dbj|BAF00744.1| putative ATP-dependent RNA helicase [Arabidopsis...   383   e-104
emb|CAA66825.1| RNA helicase [Arabidopsis thaliana] gi|1495271|e...   383   e-104
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   379   e-103
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   377   e-103

>ref|NP_189288.1| ATP-dependent RNA helicase DHX8/PRP22 [Arabidopsis thaliana]
            gi|27735187|sp|Q38953.2|DHX8_ARATH RecName: Full=Probable
            pre-mRNA-splicing factor ATP-dependent RNA helicase
            gi|9293935|dbj|BAB01838.1| pre-mRNA splicing factor
            ATP-dependent RNA helicase-like protein [Arabidopsis
            thaliana] gi|332643657|gb|AEE77178.1| ATP-dependent RNA
            helicase DHX8/PRP22 [Arabidopsis thaliana]
          Length = 1168

 Score =  383 bits (983), Expect = e-104
 Identities = 189/214 (88%), Positives = 200/214 (93%)
 Frame = +2

Query: 2    RAAALQSALTKXXXXXXXXXXXTILDSIPKDLNRPWEDPMPETGERHIAQELIGVGISAY 181
            RAAALQSALTK           T+LDSIPKDLNRPWEDPMPETGERH+AQEL GVG+SAY
Sbjct: 425  RAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 484

Query: 182  DMPEWKKDAYGKAPSFGQRSKLSMLEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 361
            DMPEWKKDA+GK P+FGQRSKLS+ EQR+SLPIYKLKKEL+QAVHDNQVLVVIGETGSGK
Sbjct: 485  DMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGK 544

Query: 362  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFDDCTGP 541
            TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF+DCTGP
Sbjct: 545  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 604

Query: 542  DTVIKYMTDGMLLRELLIDESLSQYSVIMLDEAH 643
            DTVIKYMTDGMLLRE+LIDE+LSQYSVIMLDEAH
Sbjct: 605  DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAH 638


>dbj|BAF00744.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
           gi|110740392|dbj|BAF02091.1| putative ATP-dependent RNA
           helicase [Arabidopsis thaliana]
          Length = 767

 Score =  383 bits (983), Expect = e-104
 Identities = 189/214 (88%), Positives = 200/214 (93%)
 Frame = +2

Query: 2   RAAALQSALTKXXXXXXXXXXXTILDSIPKDLNRPWEDPMPETGERHIAQELIGVGISAY 181
           RAAALQSALTK           T+LDSIPKDLNRPWEDPMPETGERH+AQEL GVG+SAY
Sbjct: 81  RAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 140

Query: 182 DMPEWKKDAYGKAPSFGQRSKLSMLEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 361
           DMPEWKKDA+GK P+FGQRSKLS+ EQR+SLPIYKLKKEL+QAVHDNQVLVVIGETGSGK
Sbjct: 141 DMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGK 200

Query: 362 TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFDDCTGP 541
           TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF+DCTGP
Sbjct: 201 TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 260

Query: 542 DTVIKYMTDGMLLRELLIDESLSQYSVIMLDEAH 643
           DTVIKYMTDGMLLRE+LIDE+LSQYSVIMLDEAH
Sbjct: 261 DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAH 294


>emb|CAA66825.1| RNA helicase [Arabidopsis thaliana] gi|1495271|emb|CAA66613.1| RNA
            helicase [Arabidopsis thaliana]
          Length = 1121

 Score =  383 bits (983), Expect = e-104
 Identities = 189/214 (88%), Positives = 200/214 (93%)
 Frame = +2

Query: 2    RAAALQSALTKXXXXXXXXXXXTILDSIPKDLNRPWEDPMPETGERHIAQELIGVGISAY 181
            RAAALQSALTK           T+LDSIPKDLNRPWEDPMPETGERH+AQEL GVG+SAY
Sbjct: 378  RAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 437

Query: 182  DMPEWKKDAYGKAPSFGQRSKLSMLEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 361
            DMPEWKKDA+GK P+FGQRSKLS+ EQR+SLPIYKLKKEL+QAVHDNQVLVVIGETGSGK
Sbjct: 438  DMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGK 497

Query: 362  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFDDCTGP 541
            TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF+DCTGP
Sbjct: 498  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 557

Query: 542  DTVIKYMTDGMLLRELLIDESLSQYSVIMLDEAH 643
            DTVIKYMTDGMLLRE+LIDE+LSQYSVIMLDEAH
Sbjct: 558  DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAH 591


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  379 bits (972), Expect = e-103
 Identities = 189/214 (88%), Positives = 199/214 (92%)
 Frame = +2

Query: 2    RAAALQSALTKXXXXXXXXXXXTILDSIPKDLNRPWEDPMPETGERHIAQELIGVGISAY 181
            RAAALQSAL K           T+LDSIPKDLNRPWEDPMPETGERH+AQEL GVG+SAY
Sbjct: 434  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 493

Query: 182  DMPEWKKDAYGKAPSFGQRSKLSMLEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 361
            DMPEWKKDA+GKA +FGQRSKLS+ EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK
Sbjct: 494  DMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 553

Query: 362  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFDDCTGP 541
            TTQVTQYLAEAGYTT+GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF+DCTGP
Sbjct: 554  TTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 613

Query: 542  DTVIKYMTDGMLLRELLIDESLSQYSVIMLDEAH 643
            DTVIKYMTDGMLLRE+LIDE+LSQYSVIMLDEAH
Sbjct: 614  DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAH 647


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  377 bits (969), Expect = e-103
 Identities = 188/214 (87%), Positives = 199/214 (92%)
 Frame = +2

Query: 2    RAAALQSALTKXXXXXXXXXXXTILDSIPKDLNRPWEDPMPETGERHIAQELIGVGISAY 181
            RAAALQSAL K           T+LDSIPKDLNRPWEDPMPETGERH+AQEL GVG+SAY
Sbjct: 429  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 488

Query: 182  DMPEWKKDAYGKAPSFGQRSKLSMLEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 361
            DMPEWKKDA+GKA +FGQRSKLS+ EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK
Sbjct: 489  DMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 548

Query: 362  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFDDCTGP 541
            TTQVTQYLAEAGYTT+GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF+DCTGP
Sbjct: 549  TTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 608

Query: 542  DTVIKYMTDGMLLRELLIDESLSQYSVIMLDEAH 643
            DTVIKYMTDGMLLRE+LID++LSQYSVIMLDEAH
Sbjct: 609  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAH 642


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