BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022356
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|7...   287   1e-75
emb|CAA71589.1| g5bf [Arabidopsis thaliana]                           287   1e-75
emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]   287   1e-75
gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]                    287   1e-75
ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding pro...   286   2e-75

>ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
           gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
           Full=Chloroplast stem-loop binding protein of 41 kDa b,
           chloroplastic; Short=CSP41-b; AltName:
           Full=Heteroglycan-interacting protein 1.3; AltName:
           Full=Protein CHLOROPLAST RNA BINDING; AltName:
           Full=Protein Gb5f; Flags: Precursor
           gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
           [Arabidopsis thaliana]
           gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
           [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
           Identical to gb|Y10557 g5bf gene from Arabidopsis
           thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
           gb|T22425, gb|N64934 and gb|T46767 come from this gene
           [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|17979099|gb|AAL47493.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA
           binding protein [Arabidopsis thaliana]
          Length = 378

 Score =  287 bits (734), Expect = 1e-75
 Identities = 134/154 (87%), Positives = 147/154 (95%)
 Frame = +3

Query: 3   FFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGL 182
           FFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLGN+KAS+++FNISG+KYVTFDGL
Sbjct: 225 FFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGL 284

Query: 183 ARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEG 362
           A+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHFFAS+EKAK  LGWKPE+DLVEG
Sbjct: 285 AKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 344

Query: 363 LTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 464
           LTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 345 LTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378


>emb|CAA71589.1| g5bf [Arabidopsis thaliana]
          Length = 378

 Score =  287 bits (734), Expect = 1e-75
 Identities = 134/154 (87%), Positives = 147/154 (95%)
 Frame = +3

Query: 3   FFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGL 182
           FFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLGN+KAS+++FNISG+KYVTFDGL
Sbjct: 225 FFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGL 284

Query: 183 ARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEG 362
           A+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHFFAS+EKAK  LGWKPE+DLVEG
Sbjct: 285 AKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 344

Query: 363 LTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 464
           LTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 345 LTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378


>emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
          Length = 374

 Score =  287 bits (734), Expect = 1e-75
 Identities = 134/154 (87%), Positives = 147/154 (95%)
 Frame = +3

Query: 3   FFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGL 182
           FFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLGN+KAS+++FNISG+KYVTFDGL
Sbjct: 221 FFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGL 280

Query: 183 ARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEG 362
           A+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHFFAS+EKAK  LGWKPE+DLVEG
Sbjct: 281 AKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 340

Query: 363 LTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 464
           LTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 341 LTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 374


>gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
          Length = 378

 Score =  287 bits (734), Expect = 1e-75
 Identities = 134/154 (87%), Positives = 147/154 (95%)
 Frame = +3

Query: 3   FFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGL 182
           FFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLGN+KAS+++FNISG+KYVTFDGL
Sbjct: 225 FFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGL 284

Query: 183 ARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEG 362
           A+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHFFAS+EKAK  LGWKPE+DLVEG
Sbjct: 285 AKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 344

Query: 363 LTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 464
           LTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 345 LTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378


>ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
           chloroplastic-like [Cucumis sativus]
           gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast
           stem-loop binding protein of 41 kDa b,
           chloroplastic-like [Cucumis sativus]
          Length = 383

 Score =  286 bits (732), Expect = 2e-75
 Identities = 137/154 (88%), Positives = 144/154 (93%)
 Frame = +3

Query: 3   FFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGL 182
           FFHRLKAGRPIPIPNSG QITQLGHVKDLA AF+ VLGNDKASQQVFNISG+KYV+FDGL
Sbjct: 229 FFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGL 288

Query: 183 ARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEG 362
           A+ACAKAGGFPEPE+VHYNPKEFDFGKKK FPFRDQHFFASIEKAKS LGWKPE+DLVEG
Sbjct: 289 AKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEG 348

Query: 363 LTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 464
           L DSYNLDFGRGTFRK ADFSTDD+IL K LV Q
Sbjct: 349 LADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQ 382