BLASTX nr result

ID: Papaver23_contig00022208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022208
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    75   1e-13
gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyp...    73   5e-13
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly...    73   5e-13
gb|AAP54661.2| retrotransposon protein, putative, unclassified [...    73   6e-13
gb|ACB28472.1| polyprotein [Ananas comosus]                            80   1e-12

>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 75.1 bits (183), Expect(2) = 1e-13
 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -3

Query: 890  HHNKCCTFAKIVQKWRHYLSSNQSIIHRDHQSLKHFMEQRMSTTLRQKQLMKLMGFDYII 711
            +  +     + ++KWRHY+     II  D QSLK  M QR+   ++ K L+KLM FDY+I
Sbjct: 1044 YEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVI 1103

Query: 710  KYKKGMDKKSADALSRHPTSNSE-CTP 633
            +YK G +   ADALSR P    E C P
Sbjct: 1104 EYKSGKENLVADALSRSPNLKEEQCLP 1130



 Score = 27.7 bits (60), Expect(2) = 1e-13
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 630  SLIQPQWAQDLIPSYESDVVAQQ 562
            +++ P+W QD+  SYE D+ A +
Sbjct: 1132 TVVVPEWVQDIKRSYEEDIFAHK 1154



 Score = 58.2 bits (139), Expect(2) = 7e-08
 Identities = 31/75 (41%), Positives = 42/75 (56%)
 Frame = -2

Query: 465  QLKEKIGVQATHLIQVPVVDETGQFIVEPVAVLGHRTTLRADIQVPQVLILWSSSSPEEV 286
            QLK+ +G +A  +  +P +   GQ   EP AVL  R   R +  V Q LILW + +P E 
Sbjct: 1535 QLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEA 1594

Query: 285  TLEDTAQITAHFPSF 241
            T ED + I A FP+F
Sbjct: 1595 TWEDASYIQAAFPNF 1609



 Score = 25.4 bits (54), Expect(2) = 7e-08
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 509  LE*PVGSRIHPVFHSS*RKK 450
            L+ P G+ IHPVFH S  KK
Sbjct: 1519 LQLPDGAGIHPVFHVSQLKK 1538


>gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group] gi|108706266|gb|ABF94061.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1159

 Score = 72.8 bits (177), Expect(2) = 5e-13
 Identities = 36/73 (49%), Positives = 46/73 (63%)
 Frame = -3

Query: 857 VQKWRHYLSSNQSIIHRDHQSLKHFMEQRMSTTLRQKQLMKLMGFDYIIKYKKGMDKKSA 678
           V KWR YL     II  DH+SL H  +Q + T L+QK + KLMG  Y  +YK+G+D   A
Sbjct: 144 VDKWRCYLQRGPFIIKTDHKSLCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVDNIVA 203

Query: 677 DALSRHPTSNSEC 639
           DALSR P+S+  C
Sbjct: 204 DALSRMPSSSQFC 216



 Score = 28.1 bits (61), Expect(2) = 5e-13
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 630 SLIQPQWAQDLIPSYESDVVAQQ 562
           S++QP W Q++I SY  D  AQQ
Sbjct: 219 SVVQPIWIQEVINSYTVDPQAQQ 241


>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group]
          Length = 921

 Score = 72.8 bits (177), Expect(2) = 5e-13
 Identities = 35/74 (47%), Positives = 47/74 (63%)
 Frame = -3

Query: 860 IVQKWRHYLSSNQSIIHRDHQSLKHFMEQRMSTTLRQKQLMKLMGFDYIIKYKKGMDKKS 681
           +V KWR YL     II  DH+SL H  ++ + T L+QK + KLMG  Y  +YK+G+D   
Sbjct: 343 VVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIV 402

Query: 680 ADALSRHPTSNSEC 639
           ADALSR P+S+  C
Sbjct: 403 ADALSRMPSSSQFC 416



 Score = 28.1 bits (61), Expect(2) = 5e-13
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 630 SLIQPQWAQDLIPSYESDVVAQQ 562
           S++QP W Q++I SY  D  AQQ
Sbjct: 419 SVVQPIWIQEVINSYTVDPQAQQ 441


>gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 760

 Score = 72.8 bits (177), Expect(2) = 6e-13
 Identities = 35/74 (47%), Positives = 47/74 (63%)
 Frame = -3

Query: 860 IVQKWRHYLSSNQSIIHRDHQSLKHFMEQRMSTTLRQKQLMKLMGFDYIIKYKKGMDKKS 681
           +V KWR YL     II  DH+SL H  ++ + T L+QK + KLMG  Y  +YK+G+D   
Sbjct: 182 VVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIV 241

Query: 680 ADALSRHPTSNSEC 639
           ADALSR P+S+  C
Sbjct: 242 ADALSRMPSSSQFC 255



 Score = 28.1 bits (61), Expect(2) = 6e-13
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 630 SLIQPQWAQDLIPSYESDVVAQQ 562
           S++QP W Q++I SY  D  AQQ
Sbjct: 258 SVVQPIWIQEVINSYTVDPQAQQ 280


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = -3

Query: 857 VQKWRHYLSSNQSIIHRDHQSLKHFMEQRMSTTLRQKQLMKLMGFDYIIKYKKGMDKKSA 678
           VQKWR YL      I  DHQSLK+ MEQR+ST  +QK + KLMG+DY + YKKG +   A
Sbjct: 574 VQKWRPYLIGRHFKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVA 633

Query: 677 DALSRHPT 654
           DALSR PT
Sbjct: 634 DALSRSPT 641


Top