BLASTX nr result

ID: Papaver23_contig00022020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022020
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   162   2e-38
emb|CAN75801.1| hypothetical protein VITISV_016975 [Vitis vinifera]   162   2e-38
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   157   6e-37
gb|ABD96845.1| hypothetical protein [Cleome spinosa]                  157   1e-36
ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprot...   156   2e-36

>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/98 (77%), Positives = 89/98 (90%)
 Frame = -3

Query: 296 MRQLKFHEQKLLKKTDFNVFKREHGHREIQVTRRYNLTGRDDYKKYNGMCRMVQKLVNIL 117
           MR+LKFHE+KLLKK +F  +KRE GHRE  V  RY++TGRDDYKKY+G+CRMVQKLVNIL
Sbjct: 1   MRKLKFHEKKLLKKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNIL 60

Query: 116 KQMDPKDPYRIEMSDRLLEKLYNMGVIPTRKSLALCDK 3
           KQMDP+DP+RIEM+D LLEKLYN+GVIPTRKSLALCD+
Sbjct: 61  KQMDPRDPFRIEMTDMLLEKLYNIGVIPTRKSLALCDR 98


>emb|CAN75801.1| hypothetical protein VITISV_016975 [Vitis vinifera]
          Length = 164

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/98 (77%), Positives = 89/98 (90%)
 Frame = -3

Query: 296 MRQLKFHEQKLLKKTDFNVFKREHGHREIQVTRRYNLTGRDDYKKYNGMCRMVQKLVNIL 117
           MR+LKFHE+KLLKK +F  +KRE GHRE  V  RY++TGRDDYKKY+G+CRMVQKLVNIL
Sbjct: 1   MRKLKFHEKKLLKKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNIL 60

Query: 116 KQMDPKDPYRIEMSDRLLEKLYNMGVIPTRKSLALCDK 3
           KQMDP+DP+RIEM+D LLEKLYN+GVIPTRKSLALCD+
Sbjct: 61  KQMDPRDPFRIEMTDMLLEKLYNIGVIPTRKSLALCDR 98


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  157 bits (398), Expect = 6e-37
 Identities = 73/98 (74%), Positives = 89/98 (90%)
 Frame = -3

Query: 296 MRQLKFHEQKLLKKTDFNVFKREHGHREIQVTRRYNLTGRDDYKKYNGMCRMVQKLVNIL 117
           MR+LKFHE+KLLKK +F ++KRE  HRE +V +RY++  RDDYKKY+G+CRMVQKLVNIL
Sbjct: 1   MRKLKFHEKKLLKKVNFLLWKREGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNIL 60

Query: 116 KQMDPKDPYRIEMSDRLLEKLYNMGVIPTRKSLALCDK 3
           KQMDP+DPYR+EM+D LLEKLYNMGVIP+RKSLALCD+
Sbjct: 61  KQMDPRDPYRVEMTDILLEKLYNMGVIPSRKSLALCDR 98


>gb|ABD96845.1| hypothetical protein [Cleome spinosa]
          Length = 182

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/98 (75%), Positives = 87/98 (88%)
 Frame = -3

Query: 296 MRQLKFHEQKLLKKTDFNVFKREHGHREIQVTRRYNLTGRDDYKKYNGMCRMVQKLVNIL 117
           MR+LKFHE+KLLKKT+F  +KRE GHRE QV +RY++ GRDDYKKY+G+CR VQKL NIL
Sbjct: 1   MRKLKFHEKKLLKKTNFLEWKRERGHRENQVMQRYHVVGRDDYKKYSGLCRTVQKLTNIL 60

Query: 116 KQMDPKDPYRIEMSDRLLEKLYNMGVIPTRKSLALCDK 3
           KQMD  DP+RI+M+D LLEKLYNMGVIPTRKSLALCD+
Sbjct: 61  KQMDHADPFRIQMTDMLLEKLYNMGVIPTRKSLALCDR 98


>ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max] gi|356575988|ref|XP_003556117.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Glycine max] gi|255637789|gb|ACU19216.1|
           unknown [Glycine max]
          Length = 182

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/98 (71%), Positives = 89/98 (90%)
 Frame = -3

Query: 296 MRQLKFHEQKLLKKTDFNVFKREHGHREIQVTRRYNLTGRDDYKKYNGMCRMVQKLVNIL 117
           MR+LKFHE+KLLKK +F  +KRE GHRE  + +RY++TGRDDYKKY+G+C MVQKLVNIL
Sbjct: 1   MRKLKFHEKKLLKKVNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCHMVQKLVNIL 60

Query: 116 KQMDPKDPYRIEMSDRLLEKLYNMGVIPTRKSLALCDK 3
           KQMDPKDP+R++M+D+LLEKLYNMGVIPTR+S+ LC++
Sbjct: 61  KQMDPKDPFRVDMTDKLLEKLYNMGVIPTRQSITLCER 98


Top