BLASTX nr result
ID: Papaver23_contig00022019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00022019
(1189 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ... 255 4e-76
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik... 251 8e-76
ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2... 249 9e-75
ref|XP_002870430.1| tRNA pseudouridine synthase family protein [... 247 6e-73
emb|CBI33811.3| unnamed protein product [Vitis vinifera] 234 7e-71
>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 443
Score = 255 bits (652), Expect(2) = 4e-76
Identities = 135/251 (53%), Positives = 167/251 (66%), Gaps = 3/251 (1%)
Frame = +2
Query: 143 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 322
TWR D++ ++EDAINS++PGK+RV+S S+VSR FHPNFSAKWRRY YIFPI D E+
Sbjct: 197 TWRKDVRPHEIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQ 256
Query: 323 GSGKND-ENSNFKEQHSELKNGC--LNVEEKDEYLVVDAETGVECRNKPRSFSVKRVNEL 493
D EN E++ E +NGC L EE E L+ + +E KPR FS+ RVN+L
Sbjct: 257 SFDSEDLENLRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQL 316
Query: 494 LLQLQGKSLSYRMFARDTKASRSTGPPTECFIYHARATEARLPLIEEVCGNDNRGQKVMC 673
L QL+GK LSY++FARDTKASR+ GPPTECFIYHARATEARLP C + G+KVMC
Sbjct: 317 LQQLEGKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLP-----CPDHGEGRKVMC 371
Query: 674 VELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVG 853
VEL+ NRFLR+MVRVLVAT+IR LM+ DGLCL DVG
Sbjct: 372 VELVANRFLRKMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVG 431
Query: 854 YEEFNPENTLI 886
Y EF+ + ++
Sbjct: 432 YTEFDAQICIV 442
Score = 57.4 bits (137), Expect(2) = 4e-76
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 3 DEFKAQKLKDKSLPLEACVAVAGRTDKGVTALNQVCSF 116
DE KAQ+LK+ PLE C VAGRTDKGV+AL QVCSF
Sbjct: 158 DEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSF 195
>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
Length = 433
Score = 251 bits (640), Expect(2) = 8e-76
Identities = 132/254 (51%), Positives = 169/254 (66%), Gaps = 5/254 (1%)
Frame = +2
Query: 143 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN-EG 319
TW+ D+K QD+EDAIN A+PGKLRV+S S+VSR FHPNFSAKWR YFYIFP+ D ++ E
Sbjct: 185 TWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQ 244
Query: 320 IGSGKND-ENSNFKEQHSELKNGC---LNVEEKDEYLVVDAETGVECRNKPRSFSVKRVN 487
I + D + +F E++ E + C N E E L+ D + E R KP +FS+ RV+
Sbjct: 245 ISENEMDIQKISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVD 304
Query: 488 ELLLQLQGKSLSYRMFARDTKASRSTGPPTECFIYHARATEARLPLIEEVCGNDNRGQKV 667
+LL QL+GK LSY++FARDTKASR+ GPPTECF++HARATEARL +D G KV
Sbjct: 305 QLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQF-----SDDGEGTKV 359
Query: 668 MCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLD 847
MC+EL+ NRFLR+MVRVLVAT+IR LM+ DGLCL+D
Sbjct: 360 MCIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLID 419
Query: 848 VGYEEFNPENTLIR 889
VG+ EF+P+ IR
Sbjct: 420 VGFTEFDPQICFIR 433
Score = 60.8 bits (146), Expect(2) = 8e-76
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +3
Query: 3 DEFKAQKLKDKSLPLEACVAVAGRTDKGVTALNQVCSF 116
DE KAQ+LK+K+LP+E V VAGRTDKGVTAL QVCSF
Sbjct: 146 DERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSF 183
>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
predicted protein [Populus trichocarpa]
Length = 428
Score = 249 bits (637), Expect(2) = 9e-75
Identities = 137/253 (54%), Positives = 167/253 (66%), Gaps = 5/253 (1%)
Frame = +2
Query: 143 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN--- 313
TWR D+K ++EDAIN +PGK+RV S S+VSR FHPNFSAKWRRY YIFP+ D EN
Sbjct: 182 TWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREE 241
Query: 314 -EGIGSGKN-DENSNFKEQHSELKNGCLNVEEKDEYLVVDAETGVECRNKPRSFSVKRVN 487
EG G +N + N ++Q +E G L EE E ++ E ++ KPRSFSV RVN
Sbjct: 242 IEGEGGIENFSSHENCEKQRNEC--GELASEENVENSIISDEDELQGAKKPRSFSVCRVN 299
Query: 488 ELLLQLQGKSLSYRMFARDTKASRSTGPPTECFIYHARATEARLPLIEEVCGNDNRGQKV 667
+LL QL+GK LSY+MFARDTKASR+ GPPTECF+YHARATE RLP + +G +V
Sbjct: 300 QLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLP-----SPDHEKGIRV 354
Query: 668 MCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLD 847
MCVELI NRFLR+MVRVLVAT++R LM+ DGLCL+D
Sbjct: 355 MCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVD 414
Query: 848 VGYEEFNPENTLI 886
VGY EF+P N LI
Sbjct: 415 VGYTEFDPRNCLI 427
Score = 58.5 bits (140), Expect(2) = 9e-75
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +3
Query: 3 DEFKAQKLKDKSLPLEACVAVAGRTDKGVTALNQVCSF 116
DE KAQ+LK++ PLE C +VAGRTDKGV+AL QVCSF
Sbjct: 143 DEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSF 180
>ref|XP_002870430.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297316266|gb|EFH46689.1| tRNA
pseudouridine synthase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 420
Score = 247 bits (630), Expect(2) = 6e-73
Identities = 134/256 (52%), Positives = 165/256 (64%), Gaps = 8/256 (3%)
Frame = +2
Query: 143 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 322
TWR DI+ +EDAIN + GKLRVVS SKVSR FHPNFSAKWRRY YIFP+ D E+
Sbjct: 170 TWRKDIEPIAIEDAINKDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAESLH- 228
Query: 323 GSGKNDENSNFKEQHSELKNGCLNVE--------EKDEYLVVDAETGVECRNKPRSFSVK 478
SG+N EN F E H + +NG L+ E E DE + + G+E KP FSV
Sbjct: 229 ESGENHENFIFDENHEKQRNGLLSEENTEEVILSEDDELEIEETSNGLEVVEKPSDFSVI 288
Query: 479 RVNELLLQLQGKSLSYRMFARDTKASRSTGPPTECFIYHARATEARLPLIEEVCGNDNRG 658
+V++LL QLQGK LSY+MFARDTKA+R+ GPPTECF+YHARA E RL C + G
Sbjct: 289 KVDQLLQQLQGKVLSYKMFARDTKAARNEGPPTECFMYHARAAEIRLS-----CSDCVEG 343
Query: 659 QKVMCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLC 838
++VMCVEL+ NRFLR+MVRVLVAT+IR L+E +GLC
Sbjct: 344 RRVMCVELVANRFLRKMVRVLVATSIREAAAGAENDALLKLLEASCRRATAPPAPSEGLC 403
Query: 839 LLDVGYEEFNPENTLI 886
L DVGY +F+P+ +LI
Sbjct: 404 LFDVGYADFDPQTSLI 419
Score = 55.1 bits (131), Expect(2) = 6e-73
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 3 DEFKAQKLKDKSLPLEACVAVAGRTDKGVTALNQVCSF 116
D+ KAQ LK K PLE V VAGRTDKGV+ALNQVCSF
Sbjct: 131 DDRKAQLLKKKCKPLEGRVLVAGRTDKGVSALNQVCSF 168
>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 234 bits (597), Expect(2) = 7e-71
Identities = 123/249 (49%), Positives = 154/249 (61%)
Frame = +2
Query: 143 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 322
TW+ D+K QD+EDAIN A+PGKLRV+S S+VSR FHPNFSAKWR YFYIFP+ D
Sbjct: 185 TWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLND------ 238
Query: 323 GSGKNDENSNFKEQHSELKNGCLNVEEKDEYLVVDAETGVECRNKPRSFSVKRVNELLLQ 502
D+ E +++ N E R KP +FS+ RV++LL Q
Sbjct: 239 ----GDDGEQISENEMDIQKISFN----------------ENRKKPSTFSISRVDQLLRQ 278
Query: 503 LQGKSLSYRMFARDTKASRSTGPPTECFIYHARATEARLPLIEEVCGNDNRGQKVMCVEL 682
L+GK LSY++FARDTKASR+ GPPTECF++HARATEARL +D G KVMC+EL
Sbjct: 279 LEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQF-----SDDGEGTKVMCIEL 333
Query: 683 IGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVGYEE 862
+ NRFLR+MVRVLVAT+IR LM+ DGLCL+DVG+ E
Sbjct: 334 VANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTE 393
Query: 863 FNPENTLIR 889
F+P+ IR
Sbjct: 394 FDPQICFIR 402
Score = 60.8 bits (146), Expect(2) = 7e-71
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +3
Query: 3 DEFKAQKLKDKSLPLEACVAVAGRTDKGVTALNQVCSF 116
DE KAQ+LK+K+LP+E V VAGRTDKGVTAL QVCSF
Sbjct: 146 DERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSF 183