BLASTX nr result

ID: Papaver23_contig00020460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020460
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   308   1e-81
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              308   1e-81
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   302   6e-80
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         299   6e-79
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   297   2e-78

>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  308 bits (789), Expect = 1e-81
 Identities = 149/211 (70%), Positives = 175/211 (82%)
 Frame = -2

Query: 843 QQEVIFIKGNWFDSRFELFITDGINTWLCKALESEVKGRASQWDQPVSDYIETAERHLGF 664
           Q E IFIK  WF S F L ITDG++ WLC A E EV+ RA+QWDQPVSDYI  AER LGF
Sbjct: 17  QSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYIALAERFLGF 76

Query: 663 RQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKTTSEILDFLMDANIRL 484
           +QPGS YGF DAGDGH+RLSWTFEK+GT LEWR KC  SPD++ TT+ +LDFLM+ANIRL
Sbjct: 77  QQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRL 136

Query: 483 SEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVGVLNSKKAKLRELRDR 304
           SEEVV K QSF+RLK+EAEKCLAQSEKF+NEKAE ESA+YAKF+GVLNSKKAKLRELRD+
Sbjct: 137 SEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQ 196

Query: 303 LSKQEHIGKSPQVEEESSGKTESYHEPTDQD 211
           +SK+E  GK PQ E+ES+ KT S+ + +D +
Sbjct: 197 ISKEETTGKLPQEEDESTDKTLSFDDESDNE 227


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  308 bits (789), Expect = 1e-81
 Identities = 149/211 (70%), Positives = 175/211 (82%)
 Frame = -2

Query: 843 QQEVIFIKGNWFDSRFELFITDGINTWLCKALESEVKGRASQWDQPVSDYIETAERHLGF 664
           Q E IFIK  WF S F L ITDG++ WLC A E EV+ RA+QWDQPVSDYI  AER LGF
Sbjct: 17  QSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYIALAERFLGF 76

Query: 663 RQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKTTSEILDFLMDANIRL 484
           +QPGS YGF DAGDGH+RLSWTFEK+GT LEWR KC  SPD++ TT+ +LDFLM+ANIRL
Sbjct: 77  QQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRL 136

Query: 483 SEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVGVLNSKKAKLRELRDR 304
           SEEVV K QSF+RLK+EAEKCLAQSEKF+NEKAE ESA+YAKF+GVLNSKKAKLRELRD+
Sbjct: 137 SEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQ 196

Query: 303 LSKQEHIGKSPQVEEESSGKTESYHEPTDQD 211
           +SK+E  GK PQ E+ES+ KT S+ + +D +
Sbjct: 197 ISKEETTGKLPQEEDESTDKTLSFDDESDNE 227


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  302 bits (774), Expect = 6e-80
 Identities = 147/216 (68%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
 Frame = -2

Query: 846 EQQEVIFIKGNWFDSRFELFITDGINTWLCKALESEVKGRASQWDQPVSDYIETAERHLG 667
           E  E IF+KG WFDS F L ITDG+N W+C A E +VK RA+QWDQPVS+YI  AE +LG
Sbjct: 21  EITEPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQWDQPVSEYINLAEHYLG 80

Query: 666 FRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKTTSEILDFLMDANIR 487
           F+QPGS Y F DAGD HKRLSWTFEK+GT LEWR KC+PSPDNK TT+ ILDFLMDANIR
Sbjct: 81  FQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNKMTTAGILDFLMDANIR 140

Query: 486 LSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVGVLNSKKAKLRELRD 307
           LSEEVV+K  SF+RLK EA+KCL QSE+F+ EK E ES++YAKF+ VLNSKK KLR+LRD
Sbjct: 141 LSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKFLAVLNSKKRKLRQLRD 200

Query: 306 RLSKQEHIGKSPQ-VEEESSGKTESYHEPTDQDDNS 202
           +LSK+E  GK PQ  EEES+ KTES+ E +   D S
Sbjct: 201 QLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKS 236


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  299 bits (765), Expect = 6e-79
 Identities = 148/212 (69%), Positives = 173/212 (81%)
 Frame = -2

Query: 846 EQQEVIFIKGNWFDSRFELFITDGINTWLCKALESEVKGRASQWDQPVSDYIETAERHLG 667
           E  E IFIKG WF   F L ITDG+N+W C A E EV+GRA+QWDQPVS YI+ AE+HLG
Sbjct: 14  EIPEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWDQPVSTYIQLAEKHLG 73

Query: 666 FRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKTTSEILDFLMDANIR 487
           F+ PGS Y F DAG+G+KRLSWTFEK+GT LEWR KC+PSPD KKTT+ ILDFLMDANIR
Sbjct: 74  FQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTTTLILDFLMDANIR 133

Query: 486 LSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVGVLNSKKAKLRELRD 307
           LSEEVVRK QSF+RLK EAEKCLAQSEKF+++K E E+A+YAKF+GVLNSKK KLRELRD
Sbjct: 134 LSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLGVLNSKKRKLRELRD 193

Query: 306 RLSKQEHIGKSPQVEEESSGKTESYHEPTDQD 211
           +LSK+E  G+S Q E E S KTES+   +D +
Sbjct: 194 QLSKKEISGESAQ-EGEDSDKTESFDRGSDDE 224


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  297 bits (761), Expect = 2e-78
 Identities = 147/212 (69%), Positives = 173/212 (81%)
 Frame = -2

Query: 846 EQQEVIFIKGNWFDSRFELFITDGINTWLCKALESEVKGRASQWDQPVSDYIETAERHLG 667
           E  E IFIKG WF   F L ITDG+N+W C A E EV+ RA+QWDQPVS YI+ AE+HLG
Sbjct: 14  EIPEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQWDQPVSTYIQLAEKHLG 73

Query: 666 FRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKTTSEILDFLMDANIR 487
           F+ PGS Y F DAG+G+KRLSWTFEK+GT LEWR KC+PSPD KKTT+ ILDFLMDANIR
Sbjct: 74  FQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTTTLILDFLMDANIR 133

Query: 486 LSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVGVLNSKKAKLRELRD 307
           LSEEVVRK QSF++LK EAEKCLAQSEKF+++K E E+A+YAKF+GVLNSKK KLRELRD
Sbjct: 134 LSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLGVLNSKKRKLRELRD 193

Query: 306 RLSKQEHIGKSPQVEEESSGKTESYHEPTDQD 211
           +LSK+E  G+S Q EEE S KTES+   +D +
Sbjct: 194 QLSKKEISGESAQ-EEEDSDKTESFDRGSDDE 224


Top