BLASTX nr result

ID: Papaver23_contig00020450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020450
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18968.3| unnamed protein product [Vitis vinifera]              129   7e-28
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   125   1e-26
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   119   1e-24
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   115   2e-23
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          101   3e-19

>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  129 bits (325), Expect = 7e-28
 Identities = 95/215 (44%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
 Frame = +3

Query: 3    QAARMISGEDVPSQSPSQSQ-FAMKSSHTFGKKSTNLTAEAEYPSATNNKRAKVSANNDK 179
            QAA+MIS  D  SQ P+QS       + +   +S     EA + S+ + KRA++  +  +
Sbjct: 745  QAAQMISA-DKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARH-SSVHAKRARLLEDESQ 802

Query: 180  IDLLPLDVCANVSSCTMKSIKTSIAENIRDDGSHDVPDVAAAIEDLLEQSSKI------- 338
              + P           M S  T+I   + ++ SH VPDVAAAIEDLLEQ+SKI       
Sbjct: 803  KTVPPSGAQDMDFISKMNSSGTTITA-VTEETSHVVPDVAAAIEDLLEQTSKIHDLKSPG 861

Query: 339  --------FSPDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQGVNEQRTY 494
                    FS D S + Q+ A+SHS+  +S  WL+R EK+DD       +  G  +  TY
Sbjct: 862  RTGCEKHLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDD-----ICNPPGDVKASTY 916

Query: 495  DGFSETQTESQVVVYEEDLSGRQMMIDRHRTRSSM 599
            DGFSETQTESQVV YEEDLSGRQM+IDR RTRSSM
Sbjct: 917  DGFSETQTESQVVGYEEDLSGRQMIIDRVRTRSSM 951


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  125 bits (315), Expect = 1e-26
 Identities = 95/225 (42%), Positives = 123/225 (54%), Gaps = 26/225 (11%)
 Frame = +3

Query: 3    QAARMISGEDVPSQSPSQSQ-FAMKSSHTFGKKSTNLTAEAEYPSATNNKRAKVSANNDK 179
            QAA+MIS  D  SQ P+QS       + +   +S     EA + S+ + KRA++  +  +
Sbjct: 745  QAAQMISA-DKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARH-SSVHAKRARLLEDESQ 802

Query: 180  IDLLPLDVCANVSSCTMKSIKTSIAENIRDDGSHDVPDVAAAIEDLLEQSSKI------- 338
              + P           M S  T+I   + ++ SH VPDVAAAIEDLLEQ+SKI       
Sbjct: 803  KTVPPSGAQDMDFISKMNSSGTTITA-VTEETSHVVPDVAAAIEDLLEQTSKIHDLKSPG 861

Query: 339  ------------------FSPDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSS 464
                              FS D S + Q+ A+SHS+  +S  WL+R EK+DD       +
Sbjct: 862  RTGCEKHVSLESLTIEQLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDD-----ICN 916

Query: 465  VQGVNEQRTYDGFSETQTESQVVVYEEDLSGRQMMIDRHRTRSSM 599
              G  +  TYDGFSETQTESQVV YEEDLSGRQM+IDR RTRSSM
Sbjct: 917  PPGDVKASTYDGFSETQTESQVVGYEEDLSGRQMIIDRVRTRSSM 961


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score =  119 bits (297), Expect = 1e-24
 Identities = 89/223 (39%), Positives = 118/223 (52%), Gaps = 24/223 (10%)
 Frame = +3

Query: 3    QAARMISGEDVPSQSPSQSQFAMKSSHTFGKKSTNLTAEAEYPSATNNKRAKVSANNDKI 182
            QAARMISGE+ PSQ  SQS+    +    G        E    S   +K+A++  ++D+ 
Sbjct: 736  QAARMISGEN-PSQLISQSRDLRSAPTQTGSIGIFSFGEDAQKSTKYSKKARLLKSDDQE 794

Query: 183  DLLPLDVCANVSSCTMKSIKTSIAENIRDDGSHDVPDVAAAIEDLLEQSSKIFS------ 344
              L   +   V   T+ S + + +++     SH VPDVAAAIEDLLEQ+SKI        
Sbjct: 795  AQLSFHLDDPVY--TINSTRGNDSKDTAGS-SHGVPDVAAAIEDLLEQTSKIHDQKSLGK 851

Query: 345  ------------------PDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQ 470
                              P   I+ ++   SHS I +   WL+R  K+DD +       +
Sbjct: 852  SEYSMFASVESLTIEQLYPSDPILGEDHGGSHSVIGVPNHWLNRTGKRDDLSNPSREVNR 911

Query: 471  GVNEQRTYDGFSETQTESQVVVYEEDLSGRQMMIDRHRTRSSM 599
            GV     YD F+ETQTESQVV+YEEDLSGRQM+IDR RTRSSM
Sbjct: 912  GV-----YDNFTETQTESQVVLYEEDLSGRQMIIDRVRTRSSM 949


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score =  115 bits (287), Expect = 2e-23
 Identities = 83/223 (37%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
 Frame = +3

Query: 3    QAARMISGEDVPSQSPSQSQFAMKSSHTFGKKSTNLTAEAEYPSATNNKRAKVSANNDKI 182
            QA +MIS  D+PSQ  SQSQ         G  + N++   +     +    ++ +N  K 
Sbjct: 764  QAVQMIS--DLPSQLSSQSQTLR------GTTNKNVSCGVD----NHETSFRIPSNYSKK 811

Query: 183  DLLPLDVCANVSSCTMKSI------KTSIAENIRDDGS---HDVPDVAAAIEDLLEQSSK 335
              L  + C +    +  +       K    +N+  D     H VPDVAAAIEDLLEQ+SK
Sbjct: 812  ARLVEEPCLSNKKPSASNSGIHADDKNFSKDNMLIDAGEAFHAVPDVAAAIEDLLEQTSK 871

Query: 336  ---------------IFSPDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQ 470
                           I+  D S+++++ +N H+   +S  WL+R  ++DD  +       
Sbjct: 872  MHDQRSPAQTGCERSIYPSDRSVLSEDNSNPHTVFGLSKHWLNRSGRKDDNGEASQDRRA 931

Query: 471  GVNEQRTYDGFSETQTESQVVVYEEDLSGRQMMIDRHRTRSSM 599
            G+     YDGFSETQTESQVV YEEDLSGRQM+IDR RTRSS+
Sbjct: 932  GI-----YDGFSETQTESQVVSYEEDLSGRQMLIDRVRTRSSL 969


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  101 bits (251), Expect = 3e-19
 Identities = 81/202 (40%), Positives = 104/202 (51%), Gaps = 2/202 (0%)
 Frame = +3

Query: 3    QAARMISGEDVPSQSPSQSQFAMKSSHTFGKKSTNLTAEAEYPSATNNKRAKVSANNDKI 182
            Q A+MISG    SQ  SQSQ         G  S     E    S+  +K+A++  +  + 
Sbjct: 737  QPAQMISGV---SQYTSQSQDLKSEPTQIGGTSITSFGEEVRKSSDFSKKARLLESGGQK 793

Query: 183  DLLPLDVCANVSSCTMKSIKTSIAENIRD--DGSHDVPDVAAAIEDLLEQSSKIFSPDHS 356
             LL   V  + S C   +I +S   N +D  + S  V DVAA IEDLLEQ+SKI   DH 
Sbjct: 794  SLLSSGVHLSDSIC---NINSSGGNNSKDNKESSSCVSDVAAVIEDLLEQTSKIH--DHK 848

Query: 357  IIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQGVNEQRTYDGFSETQTESQVVV 536
               +   + + ++      LS      DGN               YDGFSETQT+SQVV 
Sbjct: 849  SPERTQHDENVSLPGKRDELSTPASSKDGNN------------GMYDGFSETQTDSQVVG 896

Query: 537  YEEDLSGRQMMIDRHRTRSSMT 602
            YEEDLSGRQM+IDR RTRSS++
Sbjct: 897  YEEDLSGRQMLIDRVRTRSSIS 918


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