BLASTX nr result

ID: Papaver23_contig00019641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019641
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...   362   7e-98
gb|AFK47516.1| unknown [Lotus japonicus]                              343   3e-92
ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4...   342   1e-91
ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7...   334   2e-89
ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago tr...   333   5e-89

>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
            gi|222835451|gb|EEE73886.1| light-harvesting complex I
            protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score =  362 bits (930), Expect = 7e-98
 Identities = 182/242 (75%), Positives = 202/242 (83%), Gaps = 1/242 (0%)
 Frame = -3

Query: 1058 NKNTYRNPSPFVSSPAR-SSTRFARTCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLG 882
            NK+++     F+  PA+ SSTR     VHAQ+RPTWLPGLDPP YL+GTLAGD+GFDPLG
Sbjct: 27   NKSSFGAAETFL--PAKPSSTRCTPVVVHAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLG 84

Query: 881  LGEDPESLKWYVQAELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTT 702
            LGEDP+SLKWYVQAELVHARFAMAGVAGI             LP+WYEAGAVKFEFAST 
Sbjct: 85   LGEDPQSLKWYVQAELVHARFAMAGVAGILFTDLLRVTGIRKLPVWYEAGAVKFEFASTR 144

Query: 701  TLIIVQFLLMGFVETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLAR 522
            TLI+VQ LLMGF ETKRYMDFVSPGSQA+ G+FFG+E+ALEG E GYPGGPL NPLGLAR
Sbjct: 145  TLIVVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLESALEGLEPGYPGGPLLNPLGLAR 204

Query: 521  DAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGS 342
            D E+A VWKLKEIKNGRLAM+AM+GIFVQA VTHAGPIDNL++HLSNP H TIIQTLA S
Sbjct: 205  DIENAHVWKLKEIKNGRLAMVAMVGIFVQAAVTHAGPIDNLIEHLSNPWHRTIIQTLANS 264

Query: 341  GS 336
            GS
Sbjct: 265  GS 266


>gb|AFK47516.1| unknown [Lotus japonicus]
          Length = 266

 Score =  343 bits (881), Expect = 3e-92
 Identities = 170/249 (68%), Positives = 195/249 (78%), Gaps = 8/249 (3%)
 Frame = -3

Query: 1058 NKNTYRNPSPF--------VSSPARSSTRFARTCVHAQERPTWLPGLDPPAYLNGTLAGD 903
            N NT  NPSP+         +S A ++ R  + C   Q RPTWLPGLDPPAYL+GTLAGD
Sbjct: 18   NSNTIYNPSPYGGYSWLGPAASRAGTTPRCRQICAAMQPRPTWLPGLDPPAYLDGTLAGD 77

Query: 902  YGFDPLGLGEDPESLKWYVQAELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVK 723
            YGFDPLGLGEDPESL+WYVQAELVHARFAM GV GI             +P+W+EAGAVK
Sbjct: 78   YGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTGLSKIPVWFEAGAVK 137

Query: 722  FEFASTTTLIIVQFLLMGFVETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLF 543
            +EF +T TLIIVQ LLMGF ETKRYMDF+ PGSQA+ G+FFG+EA+ EG E GYPGGPL 
Sbjct: 138  YEFTNTQTLIIVQLLLMGFAETKRYMDFIGPGSQAKEGSFFGLEASFEGLEPGYPGGPLL 197

Query: 542  NPLGLARDAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTI 363
            NPLGLA+D ++AR  KLKEIKNGRLAM+A+LGIFVQA+VTH GPIDNLV+HLSNP H T+
Sbjct: 198  NPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTV 257

Query: 362  IQTLAGSGS 336
            IQTLA SGS
Sbjct: 258  IQTLASSGS 266


>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
            vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
            product [Vitis vinifera]
          Length = 264

 Score =  342 bits (877), Expect = 1e-91
 Identities = 169/227 (74%), Positives = 191/227 (84%), Gaps = 2/227 (0%)
 Frame = -3

Query: 1016 PARSS-TRFAR-TCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLGLGEDPESLKWYVQ 843
            PAR   +RF+  T V AQ+RPTWLPGLDPP YLNGTLAGD+GFDPLGLGEDPE+L+WYVQ
Sbjct: 37   PARPGPSRFSHGTVVQAQQRPTWLPGLDPPPYLNGTLAGDFGFDPLGLGEDPENLRWYVQ 96

Query: 842  AELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTTTLIIVQFLLMGFV 663
            AELVHARFAMAGVAGI             LP+WYEAGAVKFEFAST  L IVQ +LMGFV
Sbjct: 97   AELVHARFAMAGVAGILVTDLLRVTGISNLPVWYEAGAVKFEFASTEALFIVQLILMGFV 156

Query: 662  ETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLARDAESARVWKLKEI 483
            ETKRYMDF +PGSQA+ G+FFG+EAALEG E GYPGGPL NPLGLARD ++A  WKLKEI
Sbjct: 157  ETKRYMDFTNPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLARDIKNAHDWKLKEI 216

Query: 482  KNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGS 342
            KNGRLAM+AMLG+FVQA+VTHAGPI+NLV+HLSNP H TIIQT++ +
Sbjct: 217  KNGRLAMVAMLGVFVQASVTHAGPIENLVEHLSNPWHKTIIQTISST 263


>ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
            [Glycine max]
          Length = 263

 Score =  334 bits (857), Expect = 2e-89
 Identities = 160/226 (70%), Positives = 187/226 (82%)
 Frame = -3

Query: 1013 ARSSTRFARTCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLGLGEDPESLKWYVQAEL 834
            A ++ R+ +TCV AQ+RPTWLPGLDPP +L+GTLAGD+GFDPLGL EDP SL+WYVQAEL
Sbjct: 38   AAATPRYRQTCVGAQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAEL 97

Query: 833  VHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTTTLIIVQFLLMGFVETK 654
            VH RFAM GV GI             +P+W+EAGAVK++FA+T TL +VQ +LMGFVETK
Sbjct: 98   VHCRFAMLGVFGILVTDLLRVTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETK 157

Query: 653  RYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLARDAESARVWKLKEIKNG 474
            RYMDFVSPGSQA+ G+FFG+EA+L+G E GYPGGPL NPLGLA+D  +A  WKLKEIKNG
Sbjct: 158  RYMDFVSPGSQAKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNG 217

Query: 473  RLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGSGS 336
            RLAM+AMLGIFVQA+VTH GPIDNLV+HLSNP H TIIQTLA S S
Sbjct: 218  RLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS 263


>ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
            gi|355492086|gb|AES73289.1| Chlorophyll a-b binding
            protein [Medicago truncatula]
          Length = 267

 Score =  333 bits (854), Expect = 5e-89
 Identities = 163/231 (70%), Positives = 187/231 (80%), Gaps = 4/231 (1%)
 Frame = -3

Query: 1016 PARSST----RFARTCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLGLGEDPESLKWY 849
            PA + T    R  + C  AQ+RPTWLPGLDPP YL+GTL GD+GFDPLGLGEDPESLKWY
Sbjct: 37   PAAAGTGVTPRCKQICAAAQQRPTWLPGLDPPTYLDGTLPGDFGFDPLGLGEDPESLKWY 96

Query: 848  VQAELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTTTLIIVQFLLMG 669
            VQAELVH+RFAM GV GI             +PIW+EAGAVK+EFA+T TL++VQ LLMG
Sbjct: 97   VQAELVHSRFAMLGVLGILVTDLLRVAGVNSIPIWFEAGAVKYEFANTGTLVVVQLLLMG 156

Query: 668  FVETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLARDAESARVWKLK 489
            + ET+RYMDFVSPGSQA+ G+FFG+EA+L G E GYPGGPL NPLGLA+D +SAR WKLK
Sbjct: 157  YAETRRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLK 216

Query: 488  EIKNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGSGS 336
            EIKNGRLAM+A+LGIFVQA+VTH GPIDNLV+HLSNP H TIIQ LA S S
Sbjct: 217  EIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQILASSSS 267


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