BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018995
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   172   2e-69
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   163   6e-68
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   148   6e-61
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    97   8e-39
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   115   1e-38

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  172 bits (435), Expect(2) = 2e-69
 Identities = 81/142 (57%), Positives = 110/142 (77%)
 Frame = -2

Query: 427  GNLALKFDIRKAFDTINWDFILQSLVHFGFCEKFVNWIQAILKSAKLSIIVNGKAMGYFG 248
            GN+ALK DI KAFDT++W+F+L  L  FGF EKFV+WI  IL+SA+LS++VNGKA+G+F 
Sbjct: 581  GNVALKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFFT 640

Query: 247  CKRGVRQGDPLSPILFCLAEDVLSCALSNAFHQGLVHHIASPRGTAAPSHVLYADDIMVF 68
            C  GVRQGDPLSP+LFCL E+VLS ALS A   G +  ++  RG + P+H+LYADD+++F
Sbjct: 641  CSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFPTHILYADDVLIF 700

Query: 67   RRGTKRDVKVIMKIFDEYGHNS 2
              GTKR+++ ++KIF +Y   S
Sbjct: 701  CTGTKRNIRRLIKIFSQYSEVS 722



 Score =  117 bits (292), Expect(2) = 2e-69
 Identities = 58/112 (51%), Positives = 77/112 (68%)
 Frame = -3

Query: 762 DGFS*VFFTSFWDIVSTDVIN*VHYFFLNGWILPNANPSHVIIIPKEPGADVIEKFRPIA 583
           +GF   F+ ++WDIV  DVI  V  FF++G +  N N + +++IPK PGA V+  +RPIA
Sbjct: 463 NGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIA 522

Query: 582 LGNFHFKIFGKILATRLSPIASRIISPQQRAFLKDRSIFDCIGITSEAINLL 427
           L NF FKI  KILA RL+ I  RIIS +QR F++DR I  C+ + SEAINLL
Sbjct: 523 LANFQFKIISKILADRLADITMRIISVEQRGFIRDRDISKCVILASEAINLL 574


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  163 bits (413), Expect(2) = 6e-68
 Identities = 80/141 (56%), Positives = 97/141 (68%)
 Frame = -2

Query: 427 GNLALKFDIRKAFDTINWDFILQSLVHFGFCEKFVNWIQAILKSAKLSIIVNGKAMGYFG 248
           GNLA K DI KAFDT+NW F+L+ L  FGF E F NWI AIL+SAKLSI +NG   GYF 
Sbjct: 255 GNLAFKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSICINGSQQGYFS 314

Query: 247 CKRGVRQGDPLSPILFCLAEDVLSCALSNAFHQGLVHHIASPRGTAAPSHVLYADDIMVF 68
           C RGVRQGDPLSP+LFCLAEDVLS +L+    QG +  +   R    PSH+LYADDIM+F
Sbjct: 315 CSRGVRQGDPLSPLLFCLAEDVLSRSLTKLVEQGKLKQMRGTRNCLVPSHILYADDIMIF 374

Query: 67  RRGTKRDVKVIMKIFDEYGHN 5
             G   D + + ++ +  G N
Sbjct: 375 CNGGISDAR-LQQLINVIGFN 394



 Score =  120 bits (302), Expect(2) = 6e-68
 Identities = 59/112 (52%), Positives = 77/112 (68%)
 Frame = -3

Query: 762 DGFS*VFFTSFWDIVSTDVIN*VHYFFLNGWILPNANPSHVIIIPKEPGADVIEKFRPIA 583
           DGF   F+  +WDIV  DVI  V  FF  GWILPN N + +I+IPK   AD +++FRPIA
Sbjct: 137 DGFGSCFYQIYWDIVKEDVIKAVLQFFNTGWILPNFNANTLILIPKTQNADSMDQFRPIA 196

Query: 582 LGNFHFKIFGKILATRLSPIASRIISPQQRAFLKDRSIFDCIGITSEAINLL 427
           + NF FKI  KILA RL+ I   I+S +QR F++ R+I DC+ + SEAIN+L
Sbjct: 197 MANFKFKIISKILADRLAQIMPNIVSQEQRGFIQGRNIKDCVCLASEAINML 248


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  148 bits (374), Expect(2) = 6e-61
 Identities = 71/138 (51%), Positives = 92/138 (66%)
 Frame = -2

Query: 427 GNLALKFDIRKAFDTINWDFILQSLVHFGFCEKFVNWIQAILKSAKLSIIVNGKAMGYFG 248
           GNLALK D+ KAFDT+NWDF+L  L  FGF E F NWI+ IL S+K+ I +NG   G+F 
Sbjct: 316 GNLALKIDVTKAFDTLNWDFLLLVLKTFGFNELFCNWIKTILHSSKMFISMNGAQHGFFN 375

Query: 247 CKRGVRQGDPLSPILFCLAEDVLSCALSNAFHQGLVHHIASPRGTAAPSHVLYADDIMVF 68
           C RGVRQGDPLSP+LFC+ E+VLS ++S    +GL+  IA+ R    P H  Y DD+MVF
Sbjct: 376 CNRGVRQGDPLSPLLFCIVEEVLSRSISILADKGLIDLIAASRNNCLPFHCFYVDDLMVF 435

Query: 67  RRGTKRDVKVIMKIFDEY 14
            +     + V+  +F  Y
Sbjct: 436 CKAKMSSLIVLKSLFTRY 453



 Score =  112 bits (280), Expect(2) = 6e-61
 Identities = 57/112 (50%), Positives = 75/112 (66%)
 Frame = -3

Query: 762 DGFS*VFFTSFWDIVSTDVIN*VHYFFLNGWILPNANPSHVIIIPKEPGADVIEKFRPIA 583
           D F   FF  +W+IV  DV   V  FF NGW+  N N + +I+IPK P AD ++++R IA
Sbjct: 198 DVFGACFFQIYWNIVKKDVYEAVLDFFKNGWLPNNFNANSIILIPKTPNADSVDQYRTIA 257

Query: 582 LGNFHFKIFGKILATRLSPIASRIISPQQRAFLKDRSIFDCIGITSEAINLL 427
           L NF FKI  K+LA RL+ I   IIS +QR F++ R+I DCI +TSEAIN+L
Sbjct: 258 LVNFKFKIINKVLADRLAKILPSIISKEQRGFVQGRNIRDCIALTSEAINVL 309


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 97.1 bits (240), Expect(2) = 8e-39
 Identities = 48/137 (35%), Positives = 77/137 (56%)
 Frame = -2

Query: 424 NLALKFDIRKAFDTINWDFILQSLVHFGFCEKFVNWIQAILKSAKLSIIVNGKAMGYFGC 245
           ++A+K D+ KA+D I W+F+ + L+  GF +K++ W+   + +   S ++NG   G    
Sbjct: 511 SMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVP 570

Query: 244 KRGVRQGDPLSPILFCLAEDVLSCALSNAFHQGLVHHIASPRGTAAPSHVLYADDIMVFR 65
            RG+RQGDPLSP LF L  +VLS     A  +G++  I   RG+   +H+L+ADD M F 
Sbjct: 571 SRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADDTMFFC 630

Query: 64  RGTKRDVKVIMKIFDEY 14
           +        +  I  +Y
Sbjct: 631 KTNPTCCGALSNILKKY 647



 Score = 90.1 bits (222), Expect(2) = 8e-39
 Identities = 47/112 (41%), Positives = 65/112 (58%)
 Frame = -3

Query: 762 DGFS*VFFTSFWDIVSTDVIN*VHYFFLNGWILPNANPSHVIIIPKEPGADVIEKFRPIA 583
           DGFS  FF ++WDI+  DV   +  FF++  + P  N +HV +IPK      +  +RPIA
Sbjct: 390 DGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIA 449

Query: 582 LGNFHFKIFGKILATRLSPIASRIISPQQRAFLKDRSIFDCIGITSEAINLL 427
           L N  +KI  KIL  RL P  S +IS  Q AF+  R+I D + IT E ++ L
Sbjct: 450 LCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVLITHEILHFL 501


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  115 bits (287), Expect(2) = 1e-38
 Identities = 53/140 (37%), Positives = 83/140 (59%)
 Frame = -2

Query: 421  LALKFDIRKAFDTINWDFILQSLVHFGFCEKFVNWIQAILKSAKLSIIVNGKAMGYFGCK 242
            +A+K D+ KA+D + WDF+  ++  FGFC K++ WI A +KS   S+++NG   GY    
Sbjct: 953  MAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPT 1012

Query: 241  RGVRQGDPLSPILFCLAEDVLSCALSNAFHQGLVHHIASPRGTAAPSHVLYADDIMVFRR 62
            RG+RQGDPLSP LF L  D+LS  ++     G +  +    G  A +H+ +ADD + F +
Sbjct: 1013 RGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQ 1072

Query: 61   GTKRDVKVIMKIFDEYGHNS 2
               R+ + +  +FD Y + S
Sbjct: 1073 ANVRNCQALKDVFDVYEYYS 1092



 Score = 71.2 bits (173), Expect(2) = 1e-38
 Identities = 40/114 (35%), Positives = 61/114 (53%)
 Frame = -3

Query: 762  DGFS*VFFTSFWDIVSTDVIN*VHYFFLNGWILPNANPSHVIIIPKEPGADVIEKFRPIA 583
            DG +  F+ + WDIV  DVI  V  FF   ++ P+ N +++ +IPK      +  +RPIA
Sbjct: 831  DGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIA 890

Query: 582  LGNFHFKIFGKILATRLSPIASRIISPQQRAFLKDRSIFDCIGITSEAINLLVI 421
            L N  +K+  K L  RL    + I+S  Q AF+  R I D + I  E ++ L +
Sbjct: 891  LCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKV 944