BLASTX nr result

ID: Papaver23_contig00018983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018983
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    77   1e-12
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    74   1e-11
ref|XP_003611186.1| F-box/kelch-repeat protein [Medicago truncat...    72   4e-11
ref|XP_003602616.1| F-box/kelch-repeat protein [Medicago truncat...    70   2e-10

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
 Frame = +3

Query: 3   SVELKS--LIESDEDAVEYMYPFQKP--CGDGSIEIVGSCNGLICACHAGCVFYVWNPYT 170
           S+ LKS  L     D ++ + P   P  C +  ++I+GSCNGL+C C+      +WNP  
Sbjct: 56  SIILKSSELYSLSFDLLDNIQPLDHPLMCYNHGVKILGSCNGLLCICNIVDDIALWNPSI 115

Query: 171 AEYKVILSMETPLGFLTKGSNRRMCYDSSDKNIGYGFGYDSKSCNYKFVSIFSEPDTDL- 347
             ++V+  +   L        +R     S +   +GFGYD  + +YK V I      D  
Sbjct: 116 RAHRVVPYLPVEL--------KRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRK 167

Query: 348 ---SEVQMYRLGSGSWK---SYDSCIAYRFARDEPGVFLNGALHWLASLGPGNDESQPRV 509
              SEV+++ L   SW+       C+ Y     E G++ NGALHWL S  P  D +    
Sbjct: 168 SFESEVKVFSLRKNSWRRIADMPYCVLY---PGENGIYANGALHWLVSQDP--DSTVADT 222

Query: 510 LVSMDM 527
           +V++D+
Sbjct: 223 IVALDL 228


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
 Frame = +3

Query: 3   SVELKSLIESDEDAVEYMYPFQKPCGDGS-IEIVGSCNGLICAC-HAGCVFYVWNPYTAE 176
           S++ ++  ++D++ +     F     + S IEI+GSCNGL+C   H   + Y+WNP T E
Sbjct: 72  SIDPEAYFDADDNLLTTQLKFPVSYPEYSYIEILGSCNGLVCGLIHDNPLIYIWNPSTRE 131

Query: 177 YKVILSMETPLGFLTKGSNRRMCYDSSDKNIGYGFGYDSKSCNYKFVSIFSEPDTDLSE- 353
                            S       SS+ +  YGFGYD K  +YK V +     T+ ++ 
Sbjct: 132 -----------------SRELAIPGSSEDDAFYGFGYDVKLDDYKIVRVSISTSTNSTDG 174

Query: 354 ------VQMYRLGSGSWKSYDSCIAYRFARDEPGVFLNGALHWLASLGPGNDESQPRVLV 515
                 V+++ L S  W++    +      + PG   NGALHWL  +   N  S+  V+V
Sbjct: 175 SNSETKVEVFTLKSNIWRTIQD-LRCSVLLEGPGTLANGALHWL--VRQENGGSKKCVMV 231

Query: 516 SMDM 527
           S D+
Sbjct: 232 SFDL 235


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
 Frame = +3

Query: 21  LIESDEDAVEYMYPFQKP--CGDGSIEIVGSCNGLICACHAGCVFYVWNPYTAEYKVILS 194
           L E D ++++ +     P  C    I+++GSCNGL+C C+       WNP   ++++I S
Sbjct: 61  LYELDLNSMDRVKELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPS 120

Query: 195 METPLGFLTKGSNRRMCYDSSDKNIGYGFGYDSKSCNYKFVSIFSEPDTDL----SEVQM 362
              PL  + K +N      +      YGFGYDS + +YK VSI    D       S V++
Sbjct: 121 --EPL--IRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKI 176

Query: 363 YRLGSGSWKSYDSCIAYRFARDEPGVFLNGALHWLAS 473
           Y + +  WK+  S           GVF++GALHW+ +
Sbjct: 177 YTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVT 213


>ref|XP_003611186.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355512521|gb|AES94144.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
 Frame = +3

Query: 36  EDAVEYMY-PFQKPCGDGSIEIVGSCNGLICACHAGCVFYVWNPYTAEYKVILSMETPLG 212
           ++A EY Y P  +   D    +V SC+G+IC      +  +WNP     K + +++TP  
Sbjct: 97  DNATEYQYSPINRNYYD---RLVASCDGIICFAINPNLALLWNPSMRILKQLPALDTPKE 153

Query: 213 FLTKGSNRRMCYDSSDKNIGYGFGYDSKSCNYKFVSIFS-EPDTDLSEVQMYRLGSGSWK 389
                         SD N  YGFGYD    NYK VS+F    +   +EV +Y LG+  W+
Sbjct: 154 ------------GDSDGNTIYGFGYDPFIDNYKVVSVFRYNVNACKTEVSVYTLGTDYWR 201

Query: 390 SYDSCIAYRFARDEPGVFLNGALHWLASLGPGNDESQPRVLVSMDM 527
             +   +      + G+F++G ++WLA     +D +    +VS+D+
Sbjct: 202 RIEDFPSLMIPYSQQGIFVSGTVNWLADYDL-DDNNSLGTIVSLDL 246


>ref|XP_003602616.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355491664|gb|AES72867.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 345

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
 Frame = +3

Query: 105 SCNGLICACHAGCVFYVWNPYTAEYKVILSMETPLGFLTKGSNRRMCYDSSDKNIG--YG 278
           SC+G++C   AG   ++WNP    Y V+  +E P              + SD +    Y 
Sbjct: 111 SCHGILCFAIAGLYAFLWNPSLRRYNVLPPLENP--------------EESDGSTSYVYS 156

Query: 279 FGYDSKSCNYKFVSIFSEPDTD-LSEVQMYRLGSGSWKSYDSCIAYRFARDEPGVFLNGA 455
           FGYD  S  YK V+I    DT+  +EV ++ +G+G W+   +   Y  +   PGVF++G 
Sbjct: 157 FGYDHFSNVYKVVAISHLHDTNKKNEVSVHSMGTGYWRRIHN-FPYSRSMPRPGVFVSGT 215

Query: 456 LHWLAS 473
           ++WLAS
Sbjct: 216 VNWLAS 221


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