BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018892
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   584   e-164
ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [...   584   e-164
ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t...   568   e-160
gb|AAT70180.1| MSH4 [Arabidopsis thaliana]                            568   e-160
ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arab...   567   e-159

>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
            sativus]
          Length = 770

 Score =  584 bits (1506), Expect = e-164
 Identities = 282/334 (84%), Positives = 313/334 (93%)
 Frame = -3

Query: 1004 NIYKSICENGKYASIRKSICDVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDVARRSFC 825
            NIYKSICEN KY +IRK I +VIDEDVLHARVPF+ARTQQCFAVKAGIDGLLD+ARR+FC
Sbjct: 295  NIYKSICENEKYTNIRKRIGEVIDEDVLHARVPFIARTQQCFAVKAGIDGLLDIARRTFC 354

Query: 824  DTSEAIHNLANKYREDFHLPNLKIPFNNRQGFYFSIPRRDINGNLPGKFIQVLKHGNNIH 645
            DTSEAIHNLANKYRE++ L NLK+PFNNRQGFY SIP +D+ G LP KFIQVLKHGNNI 
Sbjct: 355  DTSEAIHNLANKYREEYKLSNLKLPFNNRQGFYLSIPHKDVQGKLPNKFIQVLKHGNNIR 414

Query: 644  CSTLELASLNVRNKSAAAECYVRTELCLEGLVDAIRKDVSVVTLLAEVLCLLDMLVNSFA 465
            CSTLELASLNVRNKSAA ECY+RTE+CLEGLVDAIR+DVS++TLLAEVLCLLDM+VNSFA
Sbjct: 415  CSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTLLAEVLCLLDMIVNSFA 474

Query: 464  HTISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFIPNNIFLSEASNMVIVMGPNM 285
            HTISTKPVDRYTRP FTENGP+AI++ RHPILESIHNDF+ N+IFLSEASNM+IVMGPNM
Sbjct: 475  HTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSIFLSEASNMIIVMGPNM 534

Query: 284  SGKSTYLLQICLIVILAQIGCYVPARFASLRVVDRIFTRMGTGDSLECNSSTFMTEMRET 105
            SGKSTYL Q+CL+VILAQIGCYVPA F++LRVVDRIFTRMGT DSLE NSSTFMTEM+ET
Sbjct: 535  SGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKET 594

Query: 104  SFVMQNVSPRSLIVMDELGRATSSADGFAIAWSC 3
            +FVMQNVS RSL+V+DELGRATSS+DGFAIAWSC
Sbjct: 595  AFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSC 628


>ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis]
            gi|223529793|gb|EEF31729.1| DNA mismatch repair protein
            mutS, putative [Ricinus communis]
          Length = 553

 Score =  584 bits (1506), Expect = e-164
 Identities = 280/334 (83%), Positives = 314/334 (94%)
 Frame = -3

Query: 1004 NIYKSICENGKYASIRKSICDVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDVARRSFC 825
            N+YK+ICEN KYASIR+ I +VIDEDVLHARVPFVARTQQCFAVKAGIDGLLD+ARR+FC
Sbjct: 78   NVYKTICENEKYASIRRRIGEVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDIARRTFC 137

Query: 824  DTSEAIHNLANKYREDFHLPNLKIPFNNRQGFYFSIPRRDINGNLPGKFIQVLKHGNNIH 645
            DTSE IHNLANKYRE+F +PNLK+PFN+RQGFYFSIP +DI G LP KFIQVLKHGNNIH
Sbjct: 138  DTSEGIHNLANKYREEFKMPNLKLPFNSRQGFYFSIPHKDIQGKLPSKFIQVLKHGNNIH 197

Query: 644  CSTLELASLNVRNKSAAAECYVRTELCLEGLVDAIRKDVSVVTLLAEVLCLLDMLVNSFA 465
            CSTLELASLNVRN+SAA ECY+RTE+CLE L+DAIR+D S +TLLAEVLCLLDMLVNSFA
Sbjct: 198  CSTLELASLNVRNRSAAEECYIRTEVCLEALLDAIREDASALTLLAEVLCLLDMLVNSFA 257

Query: 464  HTISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFIPNNIFLSEASNMVIVMGPNM 285
            HTISTK VDRYTRPEFT +GPLAID+GRHPILESIHNDF+PNN+F+SEASNMVIVMGPNM
Sbjct: 258  HTISTKLVDRYTRPEFTSSGPLAIDAGRHPILESIHNDFVPNNLFVSEASNMVIVMGPNM 317

Query: 284  SGKSTYLLQICLIVILAQIGCYVPARFASLRVVDRIFTRMGTGDSLECNSSTFMTEMRET 105
            SGKSTYL Q+CLIVILAQIGCYVPARF ++R+VDRIFTRMG+ D+LE NSSTFMTEM+ET
Sbjct: 318  SGKSTYLQQVCLIVILAQIGCYVPARFLTIRIVDRIFTRMGSVDNLESNSSTFMTEMKET 377

Query: 104  SFVMQNVSPRSLIVMDELGRATSSADGFAIAWSC 3
            +F+MQNVS RSLI+MDELGRATSS+DGF+IAWSC
Sbjct: 378  AFIMQNVSQRSLIIMDELGRATSSSDGFSIAWSC 411


>ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
            gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA
            mismatch repair protein MSH4; Short=AtMSH4; AltName:
            Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1|
            DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  568 bits (1464), Expect = e-160
 Identities = 267/334 (79%), Positives = 313/334 (93%)
 Frame = -3

Query: 1004 NIYKSICENGKYASIRKSICDVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDVARRSFC 825
            N+YKS+CEN +YASIRK I +VID+DVLHARVPFVARTQQCFA+KAGIDG LD+ARR+FC
Sbjct: 317  NVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVARTQQCFALKAGIDGFLDIARRTFC 376

Query: 824  DTSEAIHNLANKYREDFHLPNLKIPFNNRQGFYFSIPRRDINGNLPGKFIQVLKHGNNIH 645
            DTSEAIHNLA+KYRE+F+LPNLK+PFNNRQGF+F IP++++ G LP KF QV+KHG NIH
Sbjct: 377  DTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGKLPNKFTQVVKHGKNIH 436

Query: 644  CSTLELASLNVRNKSAAAECYVRTELCLEGLVDAIRKDVSVVTLLAEVLCLLDMLVNSFA 465
            CS+LELASLNVRNKSAA EC++RTE CLE L+DAIR+D+S +TLLAEVLCLLDM+VNSFA
Sbjct: 437  CSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISALTLLAEVLCLLDMIVNSFA 496

Query: 464  HTISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFIPNNIFLSEASNMVIVMGPNM 285
            HTISTKPVDRY+RPE T++GPLAID+GRHPILESIHNDF+ N+IF+SEA+NM++VMGPNM
Sbjct: 497  HTISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVSNSIFMSEATNMLVVMGPNM 556

Query: 284  SGKSTYLLQICLIVILAQIGCYVPARFASLRVVDRIFTRMGTGDSLECNSSTFMTEMRET 105
            SGKSTYL Q+CL+VILAQIGCYVPARFA++RVVDRIFTRMGT D+LE NSSTFMTEMRET
Sbjct: 557  SGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRET 616

Query: 104  SFVMQNVSPRSLIVMDELGRATSSADGFAIAWSC 3
            +F+MQNV+ RSLIVMDELGRATSS+DG A+AWSC
Sbjct: 617  AFIMQNVTNRSLIVMDELGRATSSSDGLAMAWSC 650


>gb|AAT70180.1| MSH4 [Arabidopsis thaliana]
          Length = 792

 Score =  568 bits (1464), Expect = e-160
 Identities = 267/334 (79%), Positives = 313/334 (93%)
 Frame = -3

Query: 1004 NIYKSICENGKYASIRKSICDVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDVARRSFC 825
            N+YKS+CEN +YASIRK I +VID+DVLHARVPFVARTQQCFA+KAGIDG LD+ARR+FC
Sbjct: 317  NVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVARTQQCFALKAGIDGFLDIARRTFC 376

Query: 824  DTSEAIHNLANKYREDFHLPNLKIPFNNRQGFYFSIPRRDINGNLPGKFIQVLKHGNNIH 645
            DTSEAIHNLA+KYRE+F+LPNLK+PFNNRQGF+F IP++++ G LP KF QV+KHG NIH
Sbjct: 377  DTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGKLPNKFTQVVKHGKNIH 436

Query: 644  CSTLELASLNVRNKSAAAECYVRTELCLEGLVDAIRKDVSVVTLLAEVLCLLDMLVNSFA 465
            CS+LELASLNVRNKSAA EC++RTE CLE L+DAIR+D+S +TLLAEVLCLLDM+VNSFA
Sbjct: 437  CSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISALTLLAEVLCLLDMIVNSFA 496

Query: 464  HTISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFIPNNIFLSEASNMVIVMGPNM 285
            HTISTKPVDRY+RPE T++GPLAID+GRHPILESIHNDF+ N+IF+SEA+NM++VMGPNM
Sbjct: 497  HTISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVSNSIFMSEATNMLVVMGPNM 556

Query: 284  SGKSTYLLQICLIVILAQIGCYVPARFASLRVVDRIFTRMGTGDSLECNSSTFMTEMRET 105
            SGKSTYL Q+CL+VILAQIGCYVPARFA++RVVDRIFTRMGT D+LE NSSTFMTEMRET
Sbjct: 557  SGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRET 616

Query: 104  SFVMQNVSPRSLIVMDELGRATSSADGFAIAWSC 3
            +F+MQNV+ RSLIVMDELGRATSS+DG A+AWSC
Sbjct: 617  AFIMQNVTNRSLIVMDELGRATSSSDGLAMAWSC 650


>ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arabidopsis lyrata subsp.
            lyrata] gi|297315943|gb|EFH46366.1| hypothetical protein
            ARALYDRAFT_493139 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  567 bits (1462), Expect = e-159
 Identities = 266/334 (79%), Positives = 313/334 (93%)
 Frame = -3

Query: 1004 NIYKSICENGKYASIRKSICDVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDVARRSFC 825
            N+YKS+CEN +YASIRK I +VID+DVLHARVPFVARTQQCFA+KAGIDG LD+ARR+FC
Sbjct: 317  NVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVARTQQCFALKAGIDGFLDIARRTFC 376

Query: 824  DTSEAIHNLANKYREDFHLPNLKIPFNNRQGFYFSIPRRDINGNLPGKFIQVLKHGNNIH 645
            DTSEAIHNLA+KYRE+F+LPNLK+PFNNRQGF+F IP++++ G LP KF QV+KHG NIH
Sbjct: 377  DTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGKLPNKFTQVVKHGKNIH 436

Query: 644  CSTLELASLNVRNKSAAAECYVRTELCLEGLVDAIRKDVSVVTLLAEVLCLLDMLVNSFA 465
            CS+LELASLNVRNKSAA EC++RTE CLE L+DAIR+D+S +TLLAEVLCLLDM+VNSFA
Sbjct: 437  CSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISALTLLAEVLCLLDMIVNSFA 496

Query: 464  HTISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFIPNNIFLSEASNMVIVMGPNM 285
            HTISTKPVDRY+RPE T++GPLAID+GRHP+LESIHNDF+ N+IF+SEA+NM++VMGPNM
Sbjct: 497  HTISTKPVDRYSRPELTDSGPLAIDAGRHPLLESIHNDFVSNSIFMSEATNMLVVMGPNM 556

Query: 284  SGKSTYLLQICLIVILAQIGCYVPARFASLRVVDRIFTRMGTGDSLECNSSTFMTEMRET 105
            SGKSTYL Q+CL+VILAQIGCYVPARFA++RVVDRIFTRMGT D+LE NSSTFMTEMRET
Sbjct: 557  SGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRET 616

Query: 104  SFVMQNVSPRSLIVMDELGRATSSADGFAIAWSC 3
            +F+MQNV+ RSLIVMDELGRATSS+DG A+AWSC
Sbjct: 617  AFIMQNVTNRSLIVMDELGRATSSSDGLAMAWSC 650