BLASTX nr result

ID: Papaver23_contig00018836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018836
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera...   117   1e-24
ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera...   105   4e-21
ref|XP_002513314.1| pumilio, putative [Ricinus communis] gi|2235...   103   2e-20
ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]   100   9e-20
gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 ...    99   4e-19

>ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
           gi|297735758|emb|CBI18445.3| unnamed protein product
           [Vitis vinifera]
          Length = 1053

 Score =  117 bits (293), Expect = 1e-24
 Identities = 69/104 (66%), Positives = 79/104 (75%), Gaps = 6/104 (5%)
 Frame = -1

Query: 298 MATESPMRMVES---TKWPSK--EASFASTSHNMAAEELGMLLRGHKGNGREGT-VPNRS 137
           MATESPMRMVES   TKWPS    A+F S   NMAAEELG+LL GH+ +G +   VPNRS
Sbjct: 1   MATESPMRMVESSGATKWPSSMDAATFVSPLKNMAAEELGLLLNGHRLHGDQSDMVPNRS 60

Query: 136 GSAPPSMEGSFAAIGNLINQQNPNLDASLGNLSNISGQFESEEQ 5
           GSAPPSMEGSFAAIGNL+ Q+N NLD+SL +LS+     ESEEQ
Sbjct: 61  GSAPPSMEGSFAAIGNLMTQRN-NLDSSLASLSSAIENSESEEQ 103


>ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
           gi|296089553|emb|CBI39372.3| unnamed protein product
           [Vitis vinifera]
          Length = 1017

 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/103 (58%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
 Frame = -1

Query: 298 MATESPMRMVEST-KWPSKE--ASFASTSHNMAAEELGMLLRGHK--GNGREGTVPNRSG 134
           MATESP+RM+E++ KWPS +  A+FA +S +MAAEEL +LL  H+  GNGR+   PNRSG
Sbjct: 1   MATESPIRMLETSGKWPSPKETATFAPSSSSMAAEELSLLLTDHRFFGNGRD-VAPNRSG 59

Query: 133 SAPPSMEGSFAAIGNLINQQNPNLDASLGNLSNISGQFESEEQ 5
           SAPPSMEGSFAAI NL++ QN +L+A   NL+++    E EEQ
Sbjct: 60  SAPPSMEGSFAAIENLMSSQNSSLNARYANLNSLIENCEPEEQ 102


>ref|XP_002513314.1| pumilio, putative [Ricinus communis] gi|223547222|gb|EEF48717.1|
           pumilio, putative [Ricinus communis]
          Length = 1004

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 6/104 (5%)
 Frame = -1

Query: 298 MATESPMRMVES---TKWPSKE--ASFASTSHNMAAEELGMLLRGHKGN-GREGTVPNRS 137
           MATESPMR+VES    KWPS +  A F S S++M AE LG+L++ H+ +  +  TVP+RS
Sbjct: 1   MATESPMRIVESGGVRKWPSSKDAAIFGSPSNHMTAENLGLLVKEHRFHRDQTDTVPSRS 60

Query: 136 GSAPPSMEGSFAAIGNLINQQNPNLDASLGNLSNISGQFESEEQ 5
           GSAPPSMEGSFAAIG L+ QQN ++ +SL +LS+    +ESEEQ
Sbjct: 61  GSAPPSMEGSFAAIGKLLAQQNFSMSSSLKSLSSAIENYESEEQ 104


>ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
          Length = 982

 Score =  100 bits (250), Expect = 9e-20
 Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 5/103 (4%)
 Frame = -1

Query: 298 MATESPMRMVEST-KWPSKE--ASFASTSHNMAAEELGMLLRGHK--GNGREGTVPNRSG 134
           MATESP+R+ E+  KWPS +  A+F S S NMA E+LG+LL+GH+  G G++   PNRSG
Sbjct: 1   MATESPIRISEAGGKWPSHKEAAAFGSLSRNMATEDLGILLKGHRYQGGGKD-VAPNRSG 59

Query: 133 SAPPSMEGSFAAIGNLINQQNPNLDASLGNLSNISGQFESEEQ 5
           SAPPS+EGSF AI NL+ Q N   +AS  NLS+     ESEEQ
Sbjct: 60  SAPPSIEGSFLAIENLLPQHNTTQNASFANLSSAMQNCESEEQ 102


>gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
           tremuloides]
          Length = 966

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
 Frame = -1

Query: 298 MATESPMRMVES---TKWPSKEAS--FASTSHNMAAEELGMLLRGHKGNGREG-TVPNRS 137
           MATESPMRMVES    KW S + S    S   +MAAEELG+LL+    +G E  T+P+RS
Sbjct: 1   MATESPMRMVESGGARKWSSSKDSAVLGSPLRSMAAEELGLLLKRQGFHGDETETIPSRS 60

Query: 136 GSAPPSMEGSFAAIGNLINQQNPNLDASLGNLSNISGQFESEEQ 5
           GSAPPSMEGSFAAIGNL+ Q N  + +SL +L ++    ESEEQ
Sbjct: 61  GSAPPSMEGSFAAIGNLLAQHNSGMSSSLESLGSVIENCESEEQ 104


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