BLASTX nr result

ID: Papaver23_contig00018772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018772
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   114   7e-24
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   114   1e-23
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              111   8e-23
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   111   8e-23
ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|2...   101   8e-20

>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
           communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
           polymerase I 49 kDa polypeptide, putative [Ricinus
           communis]
          Length = 481

 Score =  114 bits (286), Expect = 7e-24
 Identities = 65/145 (44%), Positives = 88/145 (60%)
 Frame = +2

Query: 2   EDETERQTLGVILSYMTHLIKFKDKHSVDHQASAKDHRIPDMLLQXXXXXXXXXXXXXXX 181
           +DE ER+T   I SY+THL+KFKD HS+D  +SAK+H+ P +L Q               
Sbjct: 346 QDEVERKTYSRIFSYITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGMFTPES----- 400

Query: 182 XREMSGPKNDLLISHVLVLSLMVDDFNSNPTDIAADLRMTTLKLRPHYLNLXXXXXXXXX 361
            R++   K DLLIS+VLVLSL  DDF ++PTDIA DLR++ + +R H+ NL         
Sbjct: 401 -RKLPVEKIDLLISYVLVLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENL---GCKIVC 456

Query: 362 XXXIAQATLPVPLNFPPMEQRRRKK 436
              ++ ATLPVPL FP   QRR ++
Sbjct: 457 ENKLSLATLPVPLKFPVQRQRRARR 481


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
           gi|449480549|ref|XP_004155927.1| PREDICTED:
           uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  114 bits (285), Expect = 1e-23
 Identities = 65/144 (45%), Positives = 87/144 (60%)
 Frame = +2

Query: 2   EDETERQTLGVILSYMTHLIKFKDKHSVDHQASAKDHRIPDMLLQXXXXXXXXXXXXXXX 181
           +DE E++ L  I SY+THLIK+KD+HS+   +SAK H+IP ML Q               
Sbjct: 300 QDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHKIPSMLRQKFSSMFPTAES---- 355

Query: 182 XREMSGPKNDLLISHVLVLSLMVDDFNSNPTDIAADLRMTTLKLRPHYLNLXXXXXXXXX 361
            R +S  K +LLISHVLVLSL  D+F+S+P DIA DLR +   LR H+ NL         
Sbjct: 356 -RRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYDLRLHFDNL---GCKFIR 411

Query: 362 XXXIAQATLPVPLNFPPMEQRRRK 433
              ++ ATLP+PL FP + Q+RR+
Sbjct: 412 KNNLSLATLPIPLQFPELRQKRRR 435


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  111 bits (277), Expect = 8e-23
 Identities = 63/144 (43%), Positives = 89/144 (61%)
 Frame = +2

Query: 2   EDETERQTLGVILSYMTHLIKFKDKHSVDHQASAKDHRIPDMLLQXXXXXXXXXXXXXXX 181
           EDE E+ TL  I SY+ HL+K+KD++S+D  +SAK H+IP +L Q               
Sbjct: 256 EDEGEKTTLACIFSYINHLLKYKDRNSMD-ASSAKHHKIPGILNQKFSSMFALDSDS--- 311

Query: 182 XREMSGPKNDLLISHVLVLSLMVDDFNSNPTDIAADLRMTTLKLRPHYLNLXXXXXXXXX 361
            R ++  K DLLIS+VLVL+L  D+F ++P+DIA DLRM+ +KLR H+ +L         
Sbjct: 312 -RRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHL---GCKLVS 367

Query: 362 XXXIAQATLPVPLNFPPMEQRRRK 433
              +  ATLPVPL FP + Q+RR+
Sbjct: 368 QNKVTMATLPVPLTFPRLRQKRRR 391


>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
           vinifera]
          Length = 421

 Score =  111 bits (277), Expect = 8e-23
 Identities = 63/144 (43%), Positives = 89/144 (61%)
 Frame = +2

Query: 2   EDETERQTLGVILSYMTHLIKFKDKHSVDHQASAKDHRIPDMLLQXXXXXXXXXXXXXXX 181
           EDE E+ TL  I SY+ HL+K+KD++S+D  +SAK H+IP +L Q               
Sbjct: 286 EDEGEKTTLACIFSYINHLLKYKDRNSMD-ASSAKHHKIPGILNQKFSSMFALDSDS--- 341

Query: 182 XREMSGPKNDLLISHVLVLSLMVDDFNSNPTDIAADLRMTTLKLRPHYLNLXXXXXXXXX 361
            R ++  K DLLIS+VLVL+L  D+F ++P+DIA DLRM+ +KLR H+ +L         
Sbjct: 342 -RRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHL---GCKLVS 397

Query: 362 XXXIAQATLPVPLNFPPMEQRRRK 433
              +  ATLPVPL FP + Q+RR+
Sbjct: 398 QNKVTMATLPVPLTFPRLRQKRRR 421


>ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|222839699|gb|EEE78022.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  101 bits (251), Expect = 8e-20
 Identities = 57/145 (39%), Positives = 82/145 (56%)
 Frame = +2

Query: 2   EDETERQTLGVILSYMTHLIKFKDKHSVDHQASAKDHRIPDMLLQXXXXXXXXXXXXXXX 181
           +DE E++ L  I SY+THL+KFKD+HS+D  ASA++H+ P ++ Q               
Sbjct: 337 QDEVEKKRLSCIFSYITHLLKFKDQHSMDGAASARNHQFPSIIRQ------KFFEMFKPE 390

Query: 182 XREMSGPKNDLLISHVLVLSLMVDDFNSNPTDIAADLRMTTLKLRPHYLNLXXXXXXXXX 361
            R +S  K DLLIS+VLVL+L  DDF + P D++ DLRM    ++ HY NL         
Sbjct: 391 TRRLSVDKIDLLISYVLVLTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKN 450

Query: 362 XXXIAQATLPVPLNFPPMEQRRRKK 436
              +   TL VPL FP  +++ R +
Sbjct: 451 KYLV---TLSVPLEFPQPKRKFRNR 472


Top