BLASTX nr result

ID: Papaver23_contig00018735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018735
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887641.1| hypothetical protein ARALYDRAFT_476802 [Arab...    81   4e-13
gb|AAM61552.1| thylakoid lumen protein, chloroplast precursor [A...    81   4e-13
ref|NP_565131.1| PsbP domain-containing protein 3 [Arabidopsis t...    81   4e-13
gb|AFK48850.1| unknown [Lotus japonicus]                               79   1e-12
ref|XP_004168095.1| PREDICTED: psbP domain-containing protein 3,...    79   2e-12

>ref|XP_002887641.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
           lyrata] gi|297333482|gb|EFH63900.1| hypothetical protein
           ARALYDRAFT_476802 [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = -3

Query: 165 DWQVGQGKDNGLRALTGFYPQVASESNVSVFITLLGADFTRMESFGNVEEFAETL 1
           DWQVGQ + NG +++T FYPQ  S SNVS+ IT LG DFTRMESFG VE FAETL
Sbjct: 83  DWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETL 137


>gb|AAM61552.1| thylakoid lumen protein, chloroplast precursor [Arabidopsis
           thaliana]
          Length = 247

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = -3

Query: 165 DWQVGQGKDNGLRALTGFYPQVASESNVSVFITLLGADFTRMESFGNVEEFAETL 1
           DWQVGQ + NG +++T FYPQ  S SNVS+ IT LG DFTRMESFG VE FAETL
Sbjct: 105 DWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETL 159


>ref|NP_565131.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
           gi|18203439|sp|Q9S720.2|PPD3_ARATH RecName: Full=PsbP
           domain-containing protein 3, chloroplastic; AltName:
           Full=OEC23-like protein 2; Flags: Precursor
           gi|32815945|gb|AAP88357.1| At1g76450 [Arabidopsis
           thaliana] gi|110742837|dbj|BAE99317.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332197723|gb|AEE35844.1| PsbP domain-containing
           protein 3 [Arabidopsis thaliana]
          Length = 247

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = -3

Query: 165 DWQVGQGKDNGLRALTGFYPQVASESNVSVFITLLGADFTRMESFGNVEEFAETL 1
           DWQVGQ + NG +++T FYPQ  S SNVS+ IT LG DFTRMESFG VE FAETL
Sbjct: 105 DWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETL 159


>gb|AFK48850.1| unknown [Lotus japonicus]
          Length = 250

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 37/55 (67%), Positives = 44/55 (80%)
 Frame = -3

Query: 165 DWQVGQGKDNGLRALTGFYPQVASESNVSVFITLLGADFTRMESFGNVEEFAETL 1
           DW+VG G  +G ++LT FYP+ AS SNVSV IT LG DFT+MESFG V+EFAETL
Sbjct: 108 DWEVGTGDSSGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETL 162


>ref|XP_004168095.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
           [Cucumis sativus]
          Length = 188

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/55 (65%), Positives = 44/55 (80%)
 Frame = -3

Query: 165 DWQVGQGKDNGLRALTGFYPQVASESNVSVFITLLGADFTRMESFGNVEEFAETL 1
           DWQVG G+ NG +++T F+PQ  S SNVSV I+ LG D+TRMESFG VEEFA+TL
Sbjct: 46  DWQVGNGEPNGFKSVTAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTL 100


Top