BLASTX nr result

ID: Papaver23_contig00018480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018480
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   371   e-100
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   371   e-100
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   335   1e-89
ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containi...   325   7e-87
ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containi...   325   9e-87

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  371 bits (952), Expect = e-100
 Identities = 185/298 (62%), Positives = 223/298 (74%), Gaps = 2/298 (0%)
 Frame = +2

Query: 26   EVFACLKFFDWAGRQHGFTHTRTTFNAIFKILTREKLMDVMLSFLDKFKSRRSGHNVRFY 205
            +V +CLKFFDWAGRQ GF HTR TF+A FKIL R KLM +ML FL  +   R  H VRFY
Sbjct: 120  DVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQNYTELRYVHRVRFY 179

Query: 206  DTLVMGYAVAGKPEIALQLFGKMRFKGLDLDSFGYHVFLNALVEQGIFDVFDVISEQITM 385
            DTLVMGYAVAGKPEIALQLF KMRF+GLDLDSF YHV LNALVE+  FD F V+ EQI M
Sbjct: 180  DTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVVVEQIRM 239

Query: 386  RGFDNEVTSCLRVKNFVKQNKLKEAEEFLRGLESNG--GAVNDHMLGVLVDALCKRDMFD 559
            RG DNE+T  + VKNF KQ +L EA+ F+  L  +G  G    HM+G++VDALCKR  F 
Sbjct: 240  RGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALCKRKRFG 299

Query: 560  HAGNLLKDFWELKNVPMPVAYDIWIKNLVRAGNINEAINFVRDKKFLEGYLPAAFRYNLL 739
             AG L+++F     V +  AY +WI++LVRAG ++ A+ F+  KK  EGY+P    YN+L
Sbjct: 300  EAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSKKESEGYVPEVCGYNIL 359

Query: 740  ISRLLRENRLMDVYDLMLDMREGKVTPDKVTMNAVLCFFCKAGMVDVAFELYNSRLDY 913
            I RLLRENRL +V DL+++MREG++ PDKVTMNAVLCFFCKAGMVDVA ELYNSR ++
Sbjct: 360  ICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAEF 417


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  371 bits (952), Expect = e-100
 Identities = 185/298 (62%), Positives = 223/298 (74%), Gaps = 2/298 (0%)
 Frame = +2

Query: 26   EVFACLKFFDWAGRQHGFTHTRTTFNAIFKILTREKLMDVMLSFLDKFKSRRSGHNVRFY 205
            +V +CLKFFDWAGRQ GF HTR TF+A FKIL R KLM +ML FL  +   R  H VRFY
Sbjct: 120  DVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQNYTELRYVHRVRFY 179

Query: 206  DTLVMGYAVAGKPEIALQLFGKMRFKGLDLDSFGYHVFLNALVEQGIFDVFDVISEQITM 385
            DTLVMGYAVAGKPEIALQLF KMRF+GLDLDSF YHV LNALVE+  FD F V+ EQI M
Sbjct: 180  DTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVVVEQIRM 239

Query: 386  RGFDNEVTSCLRVKNFVKQNKLKEAEEFLRGLESNG--GAVNDHMLGVLVDALCKRDMFD 559
            RG DNE+T  + VKNF KQ +L EA+ F+  L  +G  G    HM+G++VDALCKR  F 
Sbjct: 240  RGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALCKRKRFG 299

Query: 560  HAGNLLKDFWELKNVPMPVAYDIWIKNLVRAGNINEAINFVRDKKFLEGYLPAAFRYNLL 739
             AG L+++F     V +  AY +WI++LVRAG ++ A+ F+  KK  EGY+P    YN+L
Sbjct: 300  EAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSKKESEGYVPEVCGYNIL 359

Query: 740  ISRLLRENRLMDVYDLMLDMREGKVTPDKVTMNAVLCFFCKAGMVDVAFELYNSRLDY 913
            I RLLRENRL +V DL+++MREG++ PDKVTMNAVLCFFCKAGMVDVA ELYNSR ++
Sbjct: 360  ICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAEF 417


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  335 bits (858), Expect = 1e-89
 Identities = 162/304 (53%), Positives = 223/304 (73%), Gaps = 3/304 (0%)
 Frame = +2

Query: 11   GNKTEEVFACLKFFDWAGRQHGFTHTRTTFNAIFKILTREKLMDVMLSFLDKF-KSRRSG 187
            GN  ++V +CLKFFDWAGRQ GF HTR TF+AIFKIL++ KLM +ML FLD + K R + 
Sbjct: 128  GNSKKDVLSCLKFFDWAGRQSGFYHTRATFHAIFKILSKAKLMQLMLDFLDNYMKHRFAN 187

Query: 188  HNVR--FYDTLVMGYAVAGKPEIALQLFGKMRFKGLDLDSFGYHVFLNALVEQGIFDVFD 361
            H +   FY TL+MGY+VAGKP++ALQLFGKMRF G DLD+F YH+ LN+LVE+  FD  D
Sbjct: 188  HKLGYGFYSTLIMGYSVAGKPQVALQLFGKMRFLGRDLDAFAYHILLNSLVEECCFDAVD 247

Query: 362  VISEQITMRGFDNEVTSCLRVKNFVKQNKLKEAEEFLRGLESNGGAVNDHMLGVLVDALC 541
             I++QI++RGF++ +T  + VK+F KQ  L EAE +LR +   G + N   +G+LV A C
Sbjct: 248  DIAKQISIRGFESHITHSIVVKSFCKQRMLDEAEAYLRRMILQGESGNGAAVGILVGAFC 307

Query: 542  KRDMFDHAGNLLKDFWELKNVPMPVAYDIWIKNLVRAGNINEAINFVRDKKFLEGYLPAA 721
            ++  F+ AG L+++F EL+ VP+  AY +W++NLV+ G ++ A++F + KK LE Y+P  
Sbjct: 308  QKGQFEKAGQLIEEFRELRVVPLYPAYGVWLRNLVQKGKLDGALDFFQQKKTLESYVPEI 367

Query: 722  FRYNLLISRLLRENRLMDVYDLMLDMREGKVTPDKVTMNAVLCFFCKAGMVDVAFELYNS 901
            F YN L+ RLL+ENRL +  DL+++M E   +PDKVTMNA L FFCKAGMVDVA +LYN 
Sbjct: 368  FHYNALLCRLLKENRLTEACDLLMEMMEDGFSPDKVTMNAALSFFCKAGMVDVALDLYNC 427

Query: 902  RLDY 913
            + ++
Sbjct: 428  KSEF 431



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 2/269 (0%)
 Frame = +2

Query: 95   TFNAIFKILTREKLMDVMLSFLDKFKSRRSGHNVRFYDTLVMGYAVAGKPEIALQLFGKM 274
            T + + K   +++++D   ++L +   +    N      LV  +   G+ E A QL  + 
Sbjct: 263  THSIVVKSFCKQRMLDEAEAYLRRMILQGESGNGAAVGILVGAFCQKGQFEKAGQLIEEF 322

Query: 275  RFKGLDLDSFGYHVFLNALVEQGIFD-VFDVISEQITMRGFDNEVTSCLRVK-NFVKQNK 448
            R   +      Y V+L  LV++G  D   D   ++ T+  +  E+     +    +K+N+
Sbjct: 323  RELRVVPLYPAYGVWLRNLVQKGKLDGALDFFQQKKTLESYVPEIFHYNALLCRLLKENR 382

Query: 449  LKEAEEFLRGLESNGGAVNDHMLGVLVDALCKRDMFDHAGNLLKDFWELKNVPMPVAYDI 628
            L EA + L  +  +G + +   +   +   CK  M D A +L     E    P  +  + 
Sbjct: 383  LTEACDLLMEMMEDGFSPDKVTMNAALSFFCKAGMVDVALDLYNCKSEFGLSPSTMTCNY 442

Query: 629  WIKNLVRAGNINEAINFVRDKKFLEGYLPAAFRYNLLISRLLRENRLMDVYDLMLDMREG 808
             I +L R GN+++A + ++      GY P    +++L   L RE ++  + +L     E 
Sbjct: 443  LINSLCREGNVDDAYHVLKSSS-EHGYFPGKRAFSMLTDALHREGKVEMMNELFFWALER 501

Query: 809  KVTPDKVTMNAVLCFFCKAGMVDVAFELY 895
               P     +  +   CKA  ++  + ++
Sbjct: 502  NFIPSDSMYDKFISALCKARRLEDGYLIH 530


>ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Glycine max]
          Length = 868

 Score =  325 bits (834), Expect = 7e-87
 Identities = 161/301 (53%), Positives = 204/301 (67%)
 Frame = +2

Query: 11   GNKTEEVFACLKFFDWAGRQHGFTHTRTTFNAIFKILTREKLMDVMLSFLDKFKSRRSGH 190
            G    ++  CLKFFDWAGRQ  F HTR TF +IFKIL R  L  ++L FLD F+ R   H
Sbjct: 113  GAARRDILPCLKFFDWAGRQPHFHHTRATFVSIFKILARADLKPLVLEFLDAFRRRIFHH 172

Query: 191  NVRFYDTLVMGYAVAGKPEIALQLFGKMRFKGLDLDSFGYHVFLNALVEQGIFDVFDVIS 370
              RF+D LV+GYA+AGKP+ AL  F +MRF GLDLDSF YHV L ALVE+   + FD+I 
Sbjct: 173  RGRFHDILVVGYAIAGKPQNALHAFARMRFHGLDLDSFAYHVLLEALVEKNYLNAFDIIM 232

Query: 371  EQITMRGFDNEVTSCLRVKNFVKQNKLKEAEEFLRGLESNGGAVNDHMLGVLVDALCKRD 550
             QI  RG++N +T+ + VK+  K+ +L+EAE+FL GL   G  +    +  L+DALC+  
Sbjct: 233  RQIRARGYENHMTNVIVVKHLCKERRLEEAEDFLNGLMCRGEELKGPEVSFLIDALCESY 292

Query: 551  MFDHAGNLLKDFWELKNVPMPVAYDIWIKNLVRAGNINEAINFVRDKKFLEGYLPAAFRY 730
             F+ A  L+K F     VP+  AY +WIK LVR G ++EA+ F   KK  EGY PA  RY
Sbjct: 293  RFERAVELVKQFGSSGLVPLDHAYGVWIKGLVRGGRVDEALEFFSQKKDSEGYFPATVRY 352

Query: 731  NLLISRLLRENRLMDVYDLMLDMREGKVTPDKVTMNAVLCFFCKAGMVDVAFELYNSRLD 910
            N+LI RLL+ENR  +VYDL++DM E  + PD VTMNAVLCFFCK GM DVAFELY+SR D
Sbjct: 353  NVLICRLLQENRFREVYDLLVDMNESCIPPDVVTMNAVLCFFCKVGMADVAFELYHSRSD 412

Query: 911  Y 913
            +
Sbjct: 413  F 413


>ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Glycine max]
          Length = 872

 Score =  325 bits (833), Expect = 9e-87
 Identities = 164/300 (54%), Positives = 202/300 (67%)
 Frame = +2

Query: 11   GNKTEEVFACLKFFDWAGRQHGFTHTRTTFNAIFKILTREKLMDVMLSFLDKFKSRRSGH 190
            G     +  CLKFFDWAG Q  F HTR TF AIF+IL R  L  ++L FLD F+ R   H
Sbjct: 124  GAARRNILPCLKFFDWAGHQPHFHHTRATFVAIFQILARADLKPLVLDFLDSFRRRIFHH 183

Query: 191  NVRFYDTLVMGYAVAGKPEIALQLFGKMRFKGLDLDSFGYHVFLNALVEQGIFDVFDVIS 370
             VRF+D LV+GYA+AGKP+ AL  FG+MRF GLDLDSF YHV L+ALVE+   + FD+I 
Sbjct: 184  RVRFHDILVVGYAIAGKPQNALHAFGRMRFVGLDLDSFAYHVLLDALVEKNYLNAFDIIV 243

Query: 371  EQITMRGFDNEVTSCLRVKNFVKQNKLKEAEEFLRGLESNGGAVNDHMLGVLVDALCKRD 550
             QI  RG++N +T+ + VK+  K+ +L+EAE FL GL   G  +    +  LV ALC+  
Sbjct: 244  RQIRSRGYENHMTNVIVVKHLCKERRLEEAEGFLNGLMCRGEELKGPEVSFLVGALCESY 303

Query: 551  MFDHAGNLLKDFWELKNVPMPVAYDIWIKNLVRAGNINEAINFVRDKKFLEGYLPAAFRY 730
             F+ A  L+K F     VP+  AY +WIK LVR G ++EA+ F   KK  EGY PA  RY
Sbjct: 304  RFERAFELVKQFGSSGLVPLDHAYGVWIKGLVRGGRVDEALEFFSQKKDSEGYFPATVRY 363

Query: 731  NLLISRLLRENRLMDVYDLMLDMREGKVTPDKVTMNAVLCFFCKAGMVDVAFELYNSRLD 910
            N+LI RLLRENRL +VYDL++DM E  + PD VTMNAVLCFFCK GM DVA ELYNSR D
Sbjct: 364  NVLICRLLRENRLREVYDLLVDMSESCIPPDAVTMNAVLCFFCKVGMADVALELYNSRSD 423


Top