BLASTX nr result

ID: Papaver23_contig00018412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018412
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    93   3e-17
emb|CBI17233.3| unnamed protein product [Vitis vinifera]               93   3e-17
emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera]    93   3e-17
ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 ...    91   1e-16

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 65/156 (41%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
 Frame = +3

Query: 3    EVDRFRDVKVKTACGIQGEVNEAAKRYLLNFVQWNDGQPREGIAKCTFDRTIRMSDTILM 182
            EV RF    V+T  GI+G+V +AAK  + N      G PREGIA+CTF+  I MSD + +
Sbjct: 949  EVARFEGAAVRTVSGIRGQVKKAAKDEIGNQPTKKGGAPREGIARCTFEDRILMSDIVFL 1008

Query: 183  FEWTQVEVPCIFNPLKTAPELSNRVWQCMDETEE-SKAHVLVI-VGKN--VAPEDR--RK 344
              WTQVE PC +NPL TA +  N+ WQ M    E  + H L I V K+    P +R  +K
Sbjct: 1009 RAWTQVEAPCFYNPLTTALQPRNKTWQGMKTVAELRREHNLPIPVNKDSLYRPIERTPKK 1068

Query: 345  LLTDVIGKK--------------PNRRQTLEQRRAV 410
                VI K               P  R TLE+RRAV
Sbjct: 1069 FNPLVIPKSLQATLPFESKPKDIPKGRATLERRRAV 1104


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/94 (48%), Positives = 60/94 (63%)
 Frame = +3

Query: 3    EVDRFRDVKVKTACGIQGEVNEAAKRYLLNFVQWNDGQPREGIAKCTFDRTIRMSDTILM 182
            E+ RF    V+TA GI+G+V +AAK  L N  +   G PREGIA+CTF+  I MSD + +
Sbjct: 908  EIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILMSDLVFL 967

Query: 183  FEWTQVEVPCIFNPLKTAPELSNRVWQCMDETEE 284
              WT+VEVPC FNPL TA +  ++ WQ M    E
Sbjct: 968  RAWTEVEVPCFFNPLTTALQPRDQTWQGMKTVAE 1001


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/94 (48%), Positives = 60/94 (63%)
 Frame = +3

Query: 3    EVDRFRDVKVKTACGIQGEVNEAAKRYLLNFVQWNDGQPREGIAKCTFDRTIRMSDTILM 182
            E+ RF    V+TA GI+G+V +AAK  L N  +   G PREGIA+CTF+  I MSD + +
Sbjct: 1074 EIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILMSDLVFL 1133

Query: 183  FEWTQVEVPCIFNPLKTAPELSNRVWQCMDETEE 284
              WT+VEVPC FNPL TA +  ++ WQ M    E
Sbjct: 1134 RAWTEVEVPCFFNPLTTALQPRDQTWQGMKTVAE 1167


>emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera]
          Length = 325

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/94 (48%), Positives = 60/94 (63%)
 Frame = +3

Query: 3   EVDRFRDVKVKTACGIQGEVNEAAKRYLLNFVQWNDGQPREGIAKCTFDRTIRMSDTILM 182
           E+ RF    V+TA GI+G+V +AAK  L N  +   G PREGIA+CTF+  I MSD + +
Sbjct: 94  EIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILMSDLVFL 153

Query: 183 FEWTQVEVPCIFNPLKTAPELSNRVWQCMDETEE 284
             WT+VEVPC FNPL TA +  ++ WQ M    E
Sbjct: 154 RAWTEVEVPCFFNPLTTALQPRDQTWQGMKTVAE 187


>ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 553

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   EVDRFRDVKVKTACGIQGEVNEAAKRYLLNFVQWNDGQPREGIAKCTFDRTIRMSDTILM 182
           E+ RF    V+T  GI+G+V +AAK  + N  +   G P+EGIA+CTF+  IRMSD + +
Sbjct: 322 EIARFEGASVRTVSGIRGQVKKAAKEEIGNQPKKKGGPPKEGIARCTFEDKIRMSDIVFL 381

Query: 183 FEWTQVEVPCIFNPLKTAPELSNRVWQCMDETEE-SKAHVLVI 308
             WT+VEVP  +NPL TA +  +RVWQ M    E  K H L I
Sbjct: 382 RAWTKVEVPKFYNPLTTALQPRDRVWQGMKTVAELRKEHNLPI 424


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