BLASTX nr result

ID: Papaver23_contig00018312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018312
         (1247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29363.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   397   e-108
ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   374   e-101
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   374   e-101
ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|2...   357   5e-96

>emb|CBI29363.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  397 bits (1019), Expect = e-108
 Identities = 211/329 (64%), Positives = 249/329 (75%)
 Frame = -2

Query: 1234 TTLLCPIALQGVQKLVDEEFQGIIHLRTSTLHKKVASARHDFIKLSGSENKLEALMQVLE 1055
            T L+     + VQKL+DEEFQGI+HLRTSTLHKK+ASARHDFIKLSGSENKLEAL+QVLE
Sbjct: 182  TVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLE 241

Query: 1054 PSLAKGNRVMVFCNTLNSSRAVGHYLGENQIFTVNYHGEVPAEQRVENLKKFKSETGDCP 875
            PSLAKGN+VMVFCNTLNSSRAV H+LGENQIFTVNYHGEVPAEQRVENLKKFK+E GDCP
Sbjct: 242  PSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDCP 301

Query: 874  TLVCTDLAARGLDLDVDHVIMFDFPSNAIDYLHRTGRTARMGAKGKVTSLISRKDQLLAN 695
            TLVCTDLAARGLDLDVDHVIMFDFP N+IDYLHRTGRTARMGAKGKVTSL+++KD LLA 
Sbjct: 302  TLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLAT 361

Query: 694  RIEQAIGKNESLESLTADNLRWEKAKSQVYEQKGSKNSNLVKASNAKGKINSSSSAKTSR 515
            RIE+AI KNESLE+LTADNLR + A++++ EQK +KN+NLVK S  K K    S   +S+
Sbjct: 362  RIEEAIRKNESLEALTADNLRRDVARAKISEQK-AKNANLVKVSKQKNKTKVESMKSSSK 420

Query: 514  RGRVVTAINTSSQRRGGVKVGRPSAPTKSRRATTSSAPTKPRRETTVXXXXXXXXXXXXX 335
                  +  TS ++  G K G+ S PTKS++      P+K                    
Sbjct: 421  ----AASTQTSGRKTLGGKSGKVSPPTKSKKTVKILKPSK----------SSSAGGGSKR 466

Query: 334  XXSGVKQQTDGRKSGNTNFKPTKLNVVGF 248
              SGV ++ D ++S +     +KL+VVGF
Sbjct: 467  ALSGVMKRADSKRSSSVKSSTSKLSVVGF 495


>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
          Length = 635

 Score =  397 bits (1019), Expect = e-108
 Identities = 211/329 (64%), Positives = 249/329 (75%)
 Frame = -2

Query: 1234 TTLLCPIALQGVQKLVDEEFQGIIHLRTSTLHKKVASARHDFIKLSGSENKLEALMQVLE 1055
            T L+     + VQKL+DEEFQGI+HLRTSTLHKK+ASARHDFIKLSGSENKLEAL+QVLE
Sbjct: 312  TVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLE 371

Query: 1054 PSLAKGNRVMVFCNTLNSSRAVGHYLGENQIFTVNYHGEVPAEQRVENLKKFKSETGDCP 875
            PSLAKGN+VMVFCNTLNSSRAV H+LGENQIFTVNYHGEVPAEQRVENLKKFK+E GDCP
Sbjct: 372  PSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDCP 431

Query: 874  TLVCTDLAARGLDLDVDHVIMFDFPSNAIDYLHRTGRTARMGAKGKVTSLISRKDQLLAN 695
            TLVCTDLAARGLDLDVDHVIMFDFP N+IDYLHRTGRTARMGAKGKVTSL+++KD LLA 
Sbjct: 432  TLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLAT 491

Query: 694  RIEQAIGKNESLESLTADNLRWEKAKSQVYEQKGSKNSNLVKASNAKGKINSSSSAKTSR 515
            RIE+AI KNESLE+LTADNLR + A++++ EQK +KN+NLVK S  K K    S   +S+
Sbjct: 492  RIEEAIRKNESLEALTADNLRRDVARAKISEQK-AKNANLVKVSKQKNKTKVESMKSSSK 550

Query: 514  RGRVVTAINTSSQRRGGVKVGRPSAPTKSRRATTSSAPTKPRRETTVXXXXXXXXXXXXX 335
                  +  TS ++  G K G+ S PTKS++      P+K                    
Sbjct: 551  ----AASTQTSGRKTLGGKSGKVSPPTKSKKTVKILKPSK----------SSSAGGGSKR 596

Query: 334  XXSGVKQQTDGRKSGNTNFKPTKLNVVGF 248
              SGV ++ D ++S +     +KL+VVGF
Sbjct: 597  ALSGVMKRADSKRSSSVKSSTSKLSVVGF 625


>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
            sativus]
          Length = 634

 Score =  374 bits (960), Expect = e-101
 Identities = 209/335 (62%), Positives = 244/335 (72%), Gaps = 6/335 (1%)
 Frame = -2

Query: 1234 TTLLCPIALQGVQKLVDEEFQGIIHLRTSTLHKKVASARHDFIKLSGSENKLEALMQVLE 1055
            T L+     + VQKL+DEEFQGI+HLRTSTLHKK+ASARHDFIKLSGSENKLEAL+QVLE
Sbjct: 313  TILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLE 372

Query: 1054 PSLAKGNRVMVFCNTLNSSRAVGHYLGENQIFTVNYHGEVPAEQRVENLKKFKSETGDCP 875
            PSLAKGNRVMVFCNTLNSSRAV H+LGENQI TVNYHGEVPA++RVENLKKFKS+  DCP
Sbjct: 373  PSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDADCP 432

Query: 874  TLVCTDLAARGLDLDVDHVIMFDFPSNAIDYLHRTGRTARMGAKGKVTSLISRKDQLLAN 695
            TLVCTDLAARGLDLDVDHVIMFDFPSN+IDYLHRTGRTARMGAKGKVTSL+ +KD +LA 
Sbjct: 433  TLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDNILAT 492

Query: 694  RIEQAIGKNESLESLTADNLRWEKAKSQVYEQKGSKNSNLVKASNAKGKINSSSSAKTS- 518
            RIE+AI KNESLESLTAD++  + A++++ E K +KN+ L+KAS  +    S++SA  S 
Sbjct: 493  RIEEAIRKNESLESLTADSVWRDVARNRITEHK-TKNAKLIKASTGRSGAKSATSAPKSS 551

Query: 517  ---RRGRVVTAINTSSQRRGGVKVGRPSAPTKSRRATTSSAPTKPRRETTVXXXXXXXXX 347
                +G    A  +   R+ GV V   S P KS R    + P KP  ET           
Sbjct: 552  SVHSKGEPGKASYSERTRKPGVSV---SKPVKSSR----NIPRKPSSET----------- 593

Query: 346  XXXXXXSGVKQQTDGRKSGNTNFKPT--KLNVVGF 248
                     K+Q   RK   +  K +  KLNVVGF
Sbjct: 594  ---------KKQVASRKRPGSAIKSSGQKLNVVGF 619


>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
            sativus]
          Length = 634

 Score =  374 bits (960), Expect = e-101
 Identities = 209/335 (62%), Positives = 244/335 (72%), Gaps = 6/335 (1%)
 Frame = -2

Query: 1234 TTLLCPIALQGVQKLVDEEFQGIIHLRTSTLHKKVASARHDFIKLSGSENKLEALMQVLE 1055
            T L+     + VQKL+DEEFQGI+HLRTSTLHKK+ASARHDFIKLSGSENKLEAL+QVLE
Sbjct: 313  TILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLE 372

Query: 1054 PSLAKGNRVMVFCNTLNSSRAVGHYLGENQIFTVNYHGEVPAEQRVENLKKFKSETGDCP 875
            PSLAKGNRVMVFCNTLNSSRAV H+LGENQI TVNYHGEVPA++RVENLKKFKS+  DCP
Sbjct: 373  PSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDADCP 432

Query: 874  TLVCTDLAARGLDLDVDHVIMFDFPSNAIDYLHRTGRTARMGAKGKVTSLISRKDQLLAN 695
            TLVCTDLAARGLDLDVDHVIMFDFPSN+IDYLHRTGRTARMGAKGKVTSL+ +KD +LA 
Sbjct: 433  TLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDNILAT 492

Query: 694  RIEQAIGKNESLESLTADNLRWEKAKSQVYEQKGSKNSNLVKASNAKGKINSSSSAKTS- 518
            RIE+AI KNESLESLTAD++  + A++++ E K +KN+ L+KAS  +    S++SA  S 
Sbjct: 493  RIEEAIRKNESLESLTADSVWRDVARNRITEHK-TKNAKLIKASTGRSGAKSATSAPKSS 551

Query: 517  ---RRGRVVTAINTSSQRRGGVKVGRPSAPTKSRRATTSSAPTKPRRETTVXXXXXXXXX 347
                +G    A  +   R+ GV V   S P KS R    + P KP  ET           
Sbjct: 552  SVHSKGEPGKASYSERTRKPGVSV---SKPVKSSR----NIPRKPSSET----------- 593

Query: 346  XXXXXXSGVKQQTDGRKSGNTNFKPT--KLNVVGF 248
                     K+Q   RK   +  K +  KLNVVGF
Sbjct: 594  ---------KKQVASRKRPGSAIKSSGQKLNVVGF 619


>ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|222856972|gb|EEE94519.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  357 bits (915), Expect = 5e-96
 Identities = 180/227 (79%), Positives = 202/227 (88%)
 Frame = -2

Query: 1234 TTLLCPIALQGVQKLVDEEFQGIIHLRTSTLHKKVASARHDFIKLSGSENKLEALMQVLE 1055
            T L+     + VQKL+DEEFQGI HLRTSTLHKK+ASARHDFIKLSGSENKLEAL+QVLE
Sbjct: 309  TILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLE 368

Query: 1054 PSLAKGNRVMVFCNTLNSSRAVGHYLGENQIFTVNYHGEVPAEQRVENLKKFKSETGDCP 875
            PSLAKGNRVMVFCNTLNSSRA  H+L ENQI TVNYHGEVPAEQRVENL KFKS+ GDCP
Sbjct: 369  PSLAKGNRVMVFCNTLNSSRAADHFLAENQISTVNYHGEVPAEQRVENLNKFKSDDGDCP 428

Query: 874  TLVCTDLAARGLDLDVDHVIMFDFPSNAIDYLHRTGRTARMGAKGKVTSLISRKDQLLAN 695
            TLVCTDLAARGLDLDVDHVIMFDFP N+IDYLHRTGRTARMGAKGKVTSL++RKDQ LA 
Sbjct: 429  TLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVARKDQQLAA 488

Query: 694  RIEQAIGKNESLESLTADNLRWEKAKSQVYEQKGSKNSNLVKASNAK 554
            RIE+A+ KNESLESLT DN+R + A++++ EQ+G K++ L+KASN K
Sbjct: 489  RIEEAMRKNESLESLTVDNVRRDIARARITEQQG-KSAKLIKASNQK 534


Top