BLASTX nr result

ID: Papaver23_contig00018180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018180
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    77   2e-12
ref|XP_002865315.1| F-box family protein [Arabidopsis lyrata sub...    66   6e-09
ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata sub...    65   1e-08
ref|NP_199308.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    65   1e-08
ref|NP_001189735.1| F-box protein [Arabidopsis thaliana] gi|1222...    63   5e-08

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
 Frame = -3

Query: 608 LVEGISNVKILHVSGSTLESFYWDEMNEMMPTFHDLIRLVVSSKLSDMMFFALLNLLHKM 429
           L+  ISNVK L ++G TL+S      +  +PTFH++ RL     +    +  L N LH  
Sbjct: 299 LLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLF-IGGFNWDFLPNFLHSS 357

Query: 428 PNLESVVIAQGFSPS---ENYRDLDTCRGQECLLQKLKAVEVREINGKQEDLDMIKYFLR 258
           PNLE++VI  G++     E +  L   +   CL+  LK +E+R I G+  +L+ ++Y L+
Sbjct: 358 PNLEALVIETGYTNELIPEGW--LMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLK 415

Query: 257 NSPALQIMTIAFPSSLPQYMQDS--VMKKILMLPKSSK 150
           N+  LQ MTI    S   YM     V KK+L LP+ S+
Sbjct: 416 NAEVLQQMTIDCHES---YMDQEFCVCKKLLGLPRGSR 450


>ref|XP_002865315.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311150|gb|EFH41574.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
 Frame = -3

Query: 611 NLVEGISNVKILHVSGSTLESFYWDEMNEMMPTFHDLIRLVVSSKLSDMMFFALLNLLHK 432
           + + GIS+VK + +S  TLE  Y       +P FH+L  L   +  S ++   L + L  
Sbjct: 284 DFLTGISSVKHMIISHPTLEVLYRYSKLGPLPKFHNLYHL--RAAFSSLLLPLLSDFLEI 341

Query: 431 MPNLESVVIAQGFSPSENYRDLDTCRGQECLLQKLKAVEVREINGKQE-DLDMIKYFLRN 255
            PNL+++++   +S S     +D     +CL+  L+ VE++E+  ++E  + ++ YFL N
Sbjct: 342 CPNLKNLIL--DYSVSAEPEQIDFTNVPQCLILTLEYVEIKELTMREETGIKLVNYFLEN 399

Query: 254 SPALQIMTIAFPSSLPQYMQDSVMKKILMLPKSSK 150
           S  L+ +T++F  S     +  +  ++L   K S+
Sbjct: 400 SAVLKKLTLSFIDSPMTNQESEIYMQLLTSTKRSR 434


>ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326574|gb|EFH56994.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
 Frame = -3

Query: 611 NLVEGISNVKILHVSGSTLESFYWDEMNEMMPTFHDLIRLVVSSKLSDMMFFALLNLLHK 432
           + + GIS ++ + +S  TLE  Y       +P F +L RL   +  S  MF  LL  L  
Sbjct: 284 DFLTGISCIRDMIISQRTLEVLYLYSKLGPIPKFDNLYRL--QAAFSRSMFQLLLVFLES 341

Query: 431 MPNLESVVIAQGFSPSENYRDLDTCRGQECLLQKLKAVEVRE-INGKQEDLDMIKYFLRN 255
            PNLE++++    S       L      +CLL  L+ VE+RE I G++    ++ YFL+N
Sbjct: 342 CPNLENLILDFAVSTEPEQDGLTYV--PQCLLSTLECVEIRELIMGEETGKKLVSYFLKN 399

Query: 254 SPALQIMTIAFPSSLPQYMQDSVMKKILMLPKSSK 150
           S  LQ + + F  S        + K++    K S+
Sbjct: 400 SVVLQKLIVRFKDSSIATQDSDIFKELRTFTKRSR 434


>ref|NP_199308.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262649|sp|Q9FLA2.1|FDL34_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At5g44950
           gi|10177487|dbj|BAB10878.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007796|gb|AED95179.1|
           putative F-box/FBD/LRR-repeat protein [Arabidopsis
           thaliana]
          Length = 438

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
 Frame = -3

Query: 611 NLVEGISNVKILHVSGSTLESFYWDEMNEMMPTFHDLIRLVVSSKLSDMMFFALLNLLHK 432
           + + GIS+VK + +S  TLE  Y       +P FH+L  L   +  S  +   L   L  
Sbjct: 281 DFLTGISSVKHMIISHPTLEVLYRYSKIGQLPKFHNLYHL--QAVFSSSLLQLLPAFLEI 338

Query: 431 MPNLESVVIAQGFSPSENYRDLDTCRGQECLLQKLKAVEVREINGKQED-LDMIKYFLRN 255
            PNL+++++   +S S     +D      CL+  L+ VE++++  ++E  + ++KYFL N
Sbjct: 339 CPNLKNLIL--DYSISAEPEQIDFTNLPRCLISTLEYVEIKQLTMREESGIKLVKYFLEN 396

Query: 254 SPALQIMTIAFPSSLPQYMQDSVMKKILMLPKSSK 150
           S  L+ +T++F  S     +  +  ++L   K S+
Sbjct: 397 SAVLKKLTLSFIDSPMTNQESEIYMQLLTSTKRSR 431


>ref|NP_001189735.1| F-box protein [Arabidopsis thaliana]
           gi|122223784|sp|Q0WR05.1|FBL39_ARATH RecName:
           Full=F-box/LRR-repeat protein At2g42730
           gi|110736977|dbj|BAF00444.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255068|gb|AEC10162.1| F-box
           protein [Arabidopsis thaliana]
          Length = 457

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
 Frame = -3

Query: 611 NLVEGISNVKILHVSGSTLESFYWDEMNEMMPTFHDLIRLVVSS-KLSDMMFFALLNLLH 435
           NL+ GI NV+ILH+S  TLE  Y+    + MP F  L+ L + + K        LL  + 
Sbjct: 287 NLINGIRNVRILHLSSHTLELLYFS--CKEMPLFDSLVSLSIGNDKARGWQMLPLL--IK 342

Query: 434 KMPNLESVVIAQGFSPSENYRDLDTCRGQE-------CLLQ-KLKAVEVREINGKQEDLD 279
             PNLE+++   G       R  D C   +       CL   ++K +E+    G   +L+
Sbjct: 343 NSPNLETLIF-MGLDHYITNRCGDVCVCYDTDESITSCLSSSQVKVLEILSYQGTTRELN 401

Query: 278 MIKYFLRNSPALQIMTIAFPSSLPQYMQDSVMKKILMLPKSS 153
            +K+FL   P L+++ I   ++         M+ ++MLP++S
Sbjct: 402 QMKHFLEKLPCLELVKICVVNNSNNLQTTMEMRNLMMLPRAS 443


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