BLASTX nr result

ID: Papaver23_contig00018106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018106
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    67   4e-23
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    65   2e-19
ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Sela...    57   1e-14
gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK254...    53   1e-14
ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Sela...    61   2e-14

>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 67.4 bits (163), Expect(2) = 4e-23
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = -2

Query: 429 IMALVLVALVSDFANASSITVWSGPGCNNNGQIISDCGCSAINLRGGYSF 280
           I  ++L+A+ S+  N S+ TVWSGPGCNN  +  S CGCSAI+ +GGY F
Sbjct: 11  ITVMMLIAMASEMVNGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDF 60



 Score = 65.5 bits (158), Expect(2) = 4e-23
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -3

Query: 182 TAALYNQGGCRGVAHTRLNADARMCSGFGWKSIFIQC 72
           TAALYNQ GC GVAHTR  + AR C+ FGWKSIFIQC
Sbjct: 66  TAALYNQAGCSGVAHTRFGSSARACNPFGWKSIFIQC 102


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 65.5 bits (158), Expect(2) = 2e-19
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -3

Query: 182 TAALYNQGGCRGVAHTRLNADARMCSGFGWKSIFIQC 72
           TAALYNQ GC GVAHTR  + AR C+ FGWKSIFIQC
Sbjct: 40  TAALYNQAGCSGVAHTRFGSSARACNPFGWKSIFIQC 76



 Score = 55.5 bits (132), Expect(2) = 2e-19
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = -2

Query: 381 SSITVWSGPGCNNNGQIISDCGCSAINLRGGYSF 280
           S+ TVWSGPGCNN  +  S CGCSAI+ +GGY F
Sbjct: 1   SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDF 34


>ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Selaginella moellendorffii]
           gi|300150408|gb|EFJ17059.1| hypothetical protein
           SELMODRAFT_421332 [Selaginella moellendorffii]
          Length = 101

 Score = 56.6 bits (135), Expect(2) = 1e-14
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -3

Query: 182 TAALYNQGGCRGVAHTRLNADARMCSGFGWKSIFIQC 72
           TAA YN   C+GVAHTR +   + CSGFGW S FIQC
Sbjct: 65  TAAAYNTANCQGVAHTRFSGSVQDCSGFGWNSFFIQC 101



 Score = 47.8 bits (112), Expect(2) = 1e-14
 Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
 Frame = -2

Query: 426 MALVLVALV----SDFANASSITVWSGPGCNNNGQIISDCGCSAI--NLRGGYSF 280
           M LVLV LV       ANAS    W+GPGCNN  +  S CGC+ +  +  GGYSF
Sbjct: 5   MVLVLVVLVVVGSMITANASYFDTWAGPGCNNRLERYSACGCTNVGASQHGGYSF 59


>gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK25496.1| unknown
           [Picea sitchensis] gi|224285051|gb|ACN40253.1| unknown
           [Picea sitchensis]
          Length = 105

 Score = 53.1 bits (126), Expect(2) = 1e-14
 Identities = 23/38 (60%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -3

Query: 182 TAALYNQGGCRGVAHTRLNADARM-CSGFGWKSIFIQC 72
           TA+ YN   C GVAHTR +      CSGFGWKS FIQC
Sbjct: 68  TASAYNTANCNGVAHTRFSGSVNQACSGFGWKSFFIQC 105



 Score = 51.2 bits (121), Expect(2) = 1e-14
 Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
 Frame = -2

Query: 432 AIMALVLVALVSDFANASS---ITVWSGPGCNNNGQIISDCGCSAI--NLRGGYSF 280
           A M  +LV L+  FA  S     T W+GPGCNN+    S CGCS I  N+ GGY F
Sbjct: 7   ACMMFLLVCLLLAFAQPSQGSYFTAWAGPGCNNHAARYSKCGCSNIGGNVHGGYEF 62


>ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Selaginella moellendorffii]
           gi|300150312|gb|EFJ16963.1| hypothetical protein
           SELMODRAFT_115640 [Selaginella moellendorffii]
          Length = 84

 Score = 60.8 bits (146), Expect(2) = 2e-14
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -3

Query: 182 TAALYNQGGCRGVAHTRLNADARMCSGFGWKSIFIQC 72
           TAA YN   CRGVAHTR ++  + CSGFGW+SIFIQC
Sbjct: 48  TAAAYNTANCRGVAHTRFSSSVQDCSGFGWRSIFIQC 84



 Score = 42.7 bits (99), Expect(2) = 2e-14
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -2

Query: 390 ANASSITVWSGPGCNNNGQIISDCGCSAI--NLRGGYSF 280
           ANAS    W+GPGCNN  +    CGC+ +  +  GGYSF
Sbjct: 4   ANASFFDAWAGPGCNNRLERYRACGCNNVGASQHGGYSF 42