BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018091
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   367   2e-99
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   365   5e-99
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   365   6e-99
gb|ADE77570.1| unknown [Picea sitchensis]                             360   2e-97
ref|XP_002313865.1| predicted protein [Populus trichocarpa] gi|2...   358   1e-96

>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 318

 Score =  367 bits (942), Expect = 2e-99
 Identities = 188/249 (75%), Positives = 207/249 (83%)
 Frame = +1

Query: 67  GISYQRFPKIKIRSMRDDYMKFELRDTDPSMANALRRIMISEVPTIAIDLVEIEVNSTVL 246
           G SYQRFP+IKIR ++DDY KFELRDTD SMANALRR+MI+EVPT+AIDLVEIEVNS+VL
Sbjct: 3   GASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 247 NDEFIAHRLGLIPLVSDRAMEMRFSRXXXXXXXXXXXXXXSVEFQLSVRCDEDQTVDVTS 426
           NDEFIAHRLGLIPL S+RAM MRFSR              SVEF L  +C  DQT+DVTS
Sbjct: 63  NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTS 122

Query: 427 ADLISSDLMVVPVDVALAAARSEGFDSAENKGIIIVKLRRGQELRLRAIARKGIGKDHAK 606
            DL SSD  VVPVD +     S G+DS+E +GIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 123 KDLYSSDHTVVPVDFS----DSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 607 WSPAATVTYMYEPDIHINEDMMESLTLEEKQDWIESSPTKVFDIDPTTQQVKVYDAEAYT 786
           WSPAATVT+MYEPDIHINED+MESL+LEEKQ W+ESSPTKVFDIDP TQQV V D EAYT
Sbjct: 179 WSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYT 238

Query: 787 YDDEVIKKA 813
           YD+EVIKKA
Sbjct: 239 YDEEVIKKA 247


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  365 bits (938), Expect = 5e-99
 Identities = 187/249 (75%), Positives = 209/249 (83%)
 Frame = +1

Query: 67  GISYQRFPKIKIRSMRDDYMKFELRDTDPSMANALRRIMISEVPTIAIDLVEIEVNSTVL 246
           G+SYQRFPKIKIR ++DDY KFELR+TD SMANALRR+MI+EVPT+AIDLVEIEVNS+VL
Sbjct: 3   GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 247 NDEFIAHRLGLIPLVSDRAMEMRFSRXXXXXXXXXXXXXXSVEFQLSVRCDEDQTVDVTS 426
           NDEFIAHRLGLIPL S+RAM MRFSR              SVEF L  +C  D+T+DVTS
Sbjct: 63  NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTS 122

Query: 427 ADLISSDLMVVPVDVALAAARSEGFDSAENKGIIIVKLRRGQELRLRAIARKGIGKDHAK 606
            DLISSD  VVPVD +     S G+DSA+ KGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 123 KDLISSDHTVVPVDFS----DSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 607 WSPAATVTYMYEPDIHINEDMMESLTLEEKQDWIESSPTKVFDIDPTTQQVKVYDAEAYT 786
           WSPAATVT+MYEP+IHINED+MESLTLEEK  W+ESSPTKVFDID ++QQV V DAEAYT
Sbjct: 179 WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 787 YDDEVIKKA 813
           YDDEV+KKA
Sbjct: 239 YDDEVLKKA 247


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
           vinifera]
          Length = 318

 Score =  365 bits (937), Expect = 6e-99
 Identities = 187/249 (75%), Positives = 209/249 (83%)
 Frame = +1

Query: 67  GISYQRFPKIKIRSMRDDYMKFELRDTDPSMANALRRIMISEVPTIAIDLVEIEVNSTVL 246
           G+SYQRFPKIKIR ++DDY KFELR+TD SMANALRR+MI+EVPT+AIDLVEIEVNS+VL
Sbjct: 3   GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 247 NDEFIAHRLGLIPLVSDRAMEMRFSRXXXXXXXXXXXXXXSVEFQLSVRCDEDQTVDVTS 426
           NDEFIAHRLGLIPL S+RAM MRFSR              SVEF L  +C  D+T+DVTS
Sbjct: 63  NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTS 122

Query: 427 ADLISSDLMVVPVDVALAAARSEGFDSAENKGIIIVKLRRGQELRLRAIARKGIGKDHAK 606
            DLISSD  VVPVD +     S G+DSA+ KGIIIVKLRRGQELRLRAIARKGIGKDHAK
Sbjct: 123 KDLISSDHTVVPVDFS----DSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 607 WSPAATVTYMYEPDIHINEDMMESLTLEEKQDWIESSPTKVFDIDPTTQQVKVYDAEAYT 786
           WSPAATVT+MYEP+IHINED+MESLTLEEK  W+ESSPTKVFDID ++QQV V DAEAYT
Sbjct: 179 WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 787 YDDEVIKKA 813
           YDDEV+KKA
Sbjct: 239 YDDEVLKKA 247


>gb|ADE77570.1| unknown [Picea sitchensis]
          Length = 330

 Score =  360 bits (924), Expect = 2e-97
 Identities = 181/247 (73%), Positives = 209/247 (84%)
 Frame = +1

Query: 73  SYQRFPKIKIRSMRDDYMKFELRDTDPSMANALRRIMISEVPTIAIDLVEIEVNSTVLND 252
           SYQRFP +KIR M+DDYMKFEL++TDPS+ANALRR+MI EVPTIAIDLVEIE NS+VLND
Sbjct: 10  SYQRFPTVKIREMKDDYMKFELKNTDPSIANALRRVMIGEVPTIAIDLVEIESNSSVLND 69

Query: 253 EFIAHRLGLIPLVSDRAMEMRFSRXXXXXXXXXXXXXXSVEFQLSVRCDEDQTVDVTSAD 432
           EF+AHRLGLIPL+S+RAM+MRFSR              SVEF+L+V+CD DQT+DVTS D
Sbjct: 70  EFLAHRLGLIPLISERAMDMRFSRDCDTCDGDAQCHYCSVEFKLNVKCDGDQTLDVTSLD 129

Query: 433 LISSDLMVVPVDVALAAARSEGFDSAENKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 612
           L+SSD+   PV     AA    FD++E +GIIIVKLRRGQELRLRAIARKGIGKDHAKWS
Sbjct: 130 LVSSDMRENPVVAVDRAADMNVFDASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 189

Query: 613 PAATVTYMYEPDIHINEDMMESLTLEEKQDWIESSPTKVFDIDPTTQQVKVYDAEAYTYD 792
           PAATVT+MYEPDIHINE++ME+LTL+EK++WIES PTKVFDI P TQQV V DAEAY+YD
Sbjct: 190 PAATVTFMYEPDIHINENLMETLTLDEKREWIESCPTKVFDIHPDTQQVFVVDAEAYSYD 249

Query: 793 DEVIKKA 813
           DEVIKKA
Sbjct: 250 DEVIKKA 256


>ref|XP_002313865.1| predicted protein [Populus trichocarpa] gi|222850273|gb|EEE87820.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  358 bits (918), Expect = 1e-96
 Identities = 188/253 (74%), Positives = 208/253 (82%), Gaps = 1/253 (0%)
 Frame = +1

Query: 58  MESGISYQRFPKIKIRSMRDDYMKFELRDTDPSMANALRRIMISEVPTIAIDLVEIEVNS 237
           MES +SYQRFPKIKIR M+DDY+KFELR+TD SMANALRR+MI+EVPTIAIDLVEIEVNS
Sbjct: 1   MES-VSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNS 59

Query: 238 TVLNDEFIAHRLGLIPLVSDRAMEMRFSRXXXXXXXXXXXXXXSVEFQLSVRCDEDQTVD 417
           +VLNDEFIAHRLGLIPL S+RAM MRFSR              SVEF L  +C  DQT+D
Sbjct: 60  SVLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLD 119

Query: 418 VTSADLISSDLMVVPVDVALAAARSEGFDSAE-NKGIIIVKLRRGQELRLRAIARKGIGK 594
           VTS DL SSD  V+PVD +  +  ++ FD  E  +GIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 120 VTSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGK 179

Query: 595 DHAKWSPAATVTYMYEPDIHINEDMMESLTLEEKQDWIESSPTKVFDIDPTTQQVKVYDA 774
           DHAKWSPAATVT+MYEP+IHINED+ME+LTLEEK  WIESSPTKVFDID  TQQV V D 
Sbjct: 180 DHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDP 239

Query: 775 EAYTYDDEVIKKA 813
           EAYTYDDEVIKKA
Sbjct: 240 EAYTYDDEVIKKA 252