BLASTX nr result

ID: Papaver23_contig00017906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017906
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...   135   1e-29
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...   135   1e-29
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   134   2e-29
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   132   1e-28
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   128   2e-27

>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  135 bits (340), Expect = 1e-29
 Identities = 81/256 (31%), Positives = 131/256 (51%), Gaps = 2/256 (0%)
 Frame = +2

Query: 2   TGIYGPPHPDIRKNLWQDFPTIFSNINPSTPWLLIGDFNDVLNQSEKKGGRQVTYAQSQP 181
           T +YG P    R  +W     I SN     PWL+IGDFN+ + Q+E K  R+ + +Q + 
Sbjct: 83  TFVYGEPRAQDRHLMWSLLRRIRSN--SGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRD 140

Query: 182 LLTMMDQMGFIDLGFRD-PYTWTNNQMGQDNILERLDRALANQLWRTTNPHAAITHLPRI 358
              ++ +    D+GF+  P+T+ N Q    N+  RLDR +A+  W +  P A ITHL   
Sbjct: 141 FREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSSRFPQAVITHLTTP 200

Query: 359 ASDHAPILLQKKAMDW-QGTKNYKFEHLWLSHPQLKQVVETAWEQQQDNEPTLNLQLKLI 535
           +SDHAP+LL+++     +  K  ++E +W     L +V++ AW    D     ++  K+ 
Sbjct: 201 SSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMK 260

Query: 536 TTGQTLLEWNKETFGHLPTKIKKSTAKIKNAQHQCAHQTGSDLEHWLNQEKQLRKEHEEL 715
            T   L+ W+K+  G++  KIK    K+   ++     T        N+   ++KE EE+
Sbjct: 261 VTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTD-------NEVHSVKKELEEM 313

Query: 716 LQCHATYWQQRSRIQW 763
           L     +W+QRSRI W
Sbjct: 314 LHREEIWWKQRSRITW 329


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  135 bits (339), Expect = 1e-29
 Identities = 81/256 (31%), Positives = 131/256 (51%), Gaps = 2/256 (0%)
 Frame = +2

Query: 2   TGIYGPPHPDIRKNLWQDFPTIFSNINPSTPWLLIGDFNDVLNQSEKKGGRQVTYAQSQP 181
           T +YG P    R  +W     I SN     PWL+IGDFN+ + Q+E K  R+ + +Q + 
Sbjct: 58  TFLYGEPRAQDRHLMWSLLRRIRSN--SGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRD 115

Query: 182 LLTMMDQMGFIDLGFRD-PYTWTNNQMGQDNILERLDRALANQLWRTTNPHAAITHLPRI 358
              ++ +    D+GF+  P+T+ N Q    N+  RLDR +A+  W +  P A ITHL   
Sbjct: 116 FREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSSRFPQAVITHLTTP 175

Query: 359 ASDHAPILLQKKAMDW-QGTKNYKFEHLWLSHPQLKQVVETAWEQQQDNEPTLNLQLKLI 535
           +SDHAP+LL+++     +  K  ++E +W     L +V++ AW    D     ++  K+ 
Sbjct: 176 SSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMK 235

Query: 536 TTGQTLLEWNKETFGHLPTKIKKSTAKIKNAQHQCAHQTGSDLEHWLNQEKQLRKEHEEL 715
            T   L+ W+K+  G++  KIK    K+   ++     T        N+   ++KE EE+
Sbjct: 236 VTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTD-------NEVHSVKKELEEM 288

Query: 716 LQCHATYWQQRSRIQW 763
           L     +W+QRSRI W
Sbjct: 289 LHREEIWWKQRSRITW 304


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  134 bits (337), Expect = 2e-29
 Identities = 89/263 (33%), Positives = 130/263 (49%), Gaps = 9/263 (3%)
 Frame = +2

Query: 2   TGIYGPPHPDIRKNLWQDFPTIFSNINPST--PWLLIGDFNDVLNQSEKKGGRQVTYAQS 175
           TGIYG P  + +         + S +  ++  PWL  GDFN +L  SEKKGG      ++
Sbjct: 108 TGIYGYPEEEHKDKTG----ALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREA 163

Query: 176 QPLLTMMDQMGFIDLGFRD-PYTWTNNQMGQDNILERLDRALANQLWRTTNPHAAITHLP 352
                 M++  F+DLGF    +TWTNN+ G  NI ERLDR +AN LW+   P + ++HLP
Sbjct: 164 DIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLP 223

Query: 353 RIASDHAPIL-----LQKKAMDWQGTKNYKFEHLWLSHPQLKQVVETAWEQQQDNEPTLN 517
           +  SDH PI+      Q  A   + +K ++FE +WL   +  +VV+  W +  D      
Sbjct: 224 KRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDEVVKETWMRGTD------ 277

Query: 518 LQLKLITTGQTLLEWNKETFGHLPTKIKKSTAKIKNAQHQCAHQTGSD-LEHWLNQEKQL 694
             + L  T   LL W+K+ FGH+         +I+  QHQ      S+  E  +   + L
Sbjct: 278 AGINLARTANKLLSWSKQKFGHV-------AKEIRMCQHQMKVLMESEPSEDNIMHMRAL 330

Query: 695 RKEHEELLQCHATYWQQRSRIQW 763
               +EL +    YW QRSR  W
Sbjct: 331 DARMDELEKREEVYWHQRSRQDW 353


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  132 bits (331), Expect = 1e-28
 Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 2/256 (0%)
 Frame = +2

Query: 2    TGIYGPPHPDIRKNLWQDFPTIFSNINPSTPWLLIGDFNDVLNQSEKKGGRQVTYAQSQP 181
            T +YG PH + ++  W+   + F     S PWL++GDFN+VL+ SEK GG      + + 
Sbjct: 708  TWMYGNPHDNEKRAFWRLMYSRFPV--QSLPWLVLGDFNEVLDPSEKWGGGPPLPWRIKL 765

Query: 182  LLTMMDQMGFIDLGFRDP-YTWTNNQMGQDNILERLDRALANQLWRTTNPHAAITHLPRI 358
                ++     DL F+ P ++W   + G+  I ERLDRAL N  W ++ P+  I HLP+I
Sbjct: 766  FRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKI 825

Query: 359  ASDHAPILLQKKAMDWQGTKNYKFEHLWLSHPQLKQVVETAWEQQQDNEPTLNLQLKLIT 538
             SDH P+LL         T+ ++FE +W +H +   V++ +W          +    L++
Sbjct: 826  GSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAMRSWNRNLLS 885

Query: 539  TGQTLLEWNKETFGHLPTKIKKSTAKIKNAQHQCAHQTG-SDLEHWLNQEKQLRKEHEEL 715
             G+ L  W+KE F +   ++    + I+       HQ+   D  H +N    L  +  +L
Sbjct: 886  CGKALKMWSKEKFSNPSVQVADLLSDIEK-----LHQSNPPDAHHQIN---ILTDQVTKL 937

Query: 716  LQCHATYWQQRSRIQW 763
                  YW QRSR+ W
Sbjct: 938  WTQDEMYWHQRSRVNW 953


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  128 bits (321), Expect = 2e-27
 Identities = 81/259 (31%), Positives = 121/259 (46%), Gaps = 7/259 (2%)
 Frame = +2

Query: 8    IYGPPHPDIRKNLWQDFPTIFSNINPSTPWLLIGDFNDVLNQSEKKGGRQVTYAQSQPLL 187
            +YG  H + +   W     +  N  P+TPWL+ GDFN++L   EK+GGR    +      
Sbjct: 351  LYGDAHSETKHRTWTTMRGLIDN--PTTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFR 408

Query: 188  TMMDQMGFIDLGFR-DPYTWTNNQMGQDN-ILERLDRALANQLWRTTNPHAAITHLPRIA 361
              +   G  DLGF  D +TW N+   Q+  I ERLDRA+AN  WR   P A + +     
Sbjct: 409  HALTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVINGDPRH 468

Query: 362  SDHAPILLQ-----KKAMDWQGTKNYKFEHLWLSHPQLKQVVETAWEQQQDNEPTLNLQL 526
            SDH P++++     K      G  +++FE  WL   + K+VV+ AW+     +  L +  
Sbjct: 469  SDHRPVIIELEGKNKGVRGRNGHNDFRFEAAWLEEEKFKEVVKEAWDVSAGLQ-GLPVHA 527

Query: 527  KLITTGQTLLEWNKETFGHLPTKIKKSTAKIKNAQHQCAHQTGSDLEHWLNQEKQLRKEH 706
             L      L  W+    G L  ++K    K+K     C  Q  S     + +E+ LR   
Sbjct: 528  SLAGVAAGLSSWSSNVLGDLEKRVK----KVKKELETCRRQPIS--RDQVVREEVLRYRL 581

Query: 707  EELLQCHATYWQQRSRIQW 763
            E+L Q    YW+QR+   W
Sbjct: 582  EKLEQQVDIYWKQRAHTNW 600


Top