BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016606
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    72   6e-11
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    61   1e-07
emb|CAJ75103.1| similar to ribonuclease H [Candidatus Kuenenia s...    59   4e-07
ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    58   7e-07

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = -3

Query: 515 IWQVDKG---KINTDGAVRGHPGHAGAGIICRSSATSTIKAISQPLGITTALMAETWALL 345
           IW    G   KIN DG+V G P     G+I R+S T    A +Q +G  TAL AE  A +
Sbjct: 244 IWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACM 303

Query: 344 LAVRTAIDHQWTKVWFETDSINLVQLIKTKTSPPWYIQAMIEEILLSLQSYSTPYDYSYL 165
            A+  A +   T +W ETDS+N+++     T  PW +       LL  +S  +   +   
Sbjct: 304 FAIEKAKELHLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWHNCLLFCRSIRSLCTHVNR 363

Query: 164 E*GNQAADGL 135
           E GN  AD L
Sbjct: 364 E-GNLVADAL 372


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = -3

Query: 494  KINTDGAVRGHPGHAGAGIICRSSATSTIKAISQPLGITTALMAETWALLLAVRTAIDHQ 315
            K+NTDG+V G  G A  G + R S+ S + A S  +G+ +   AET A +LA+  A  H 
Sbjct: 1024 KVNTDGSVVG--GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHG 1081

Query: 314  WTKVWFETDSINLVQLIKTKTSPPWYIQAMIEEI-LLSLQSYSTPYDYSYLE*GNQAADG 138
            W  +W E+DS + + +    +   W ++        L +Q  S+      L  GN+ AD 
Sbjct: 1082 WRNLWLESDSTSALMIFSNSSLVQWLLRNRWHNAQRLGIQVISS----HILHEGNRCADN 1137

Query: 137  LMN 129
            L N
Sbjct: 1138 LAN 1140


>emb|CAJ75103.1| similar to ribonuclease H [Candidatus Kuenenia stuttgartiensis]
          Length = 197

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
 Frame = -3

Query: 491 INTDGAVRGHPGHAGAGIICRSSATSTIKAISQPLGITTALMAETWALLLAVRTAIDHQW 312
           I+TDGA RG+PG AGAGI         ++ I + LG  T  +AE  A++LA + A+ +  
Sbjct: 69  IHTDGASRGNPGKAGAGIAIFDGNYHLVEEIGKFLGEATNNVAEYEAMILAAQKAVSYYP 128

Query: 311 TKVWFETDSINLVQLIK--TKTSPPWYIQAMIEEILLSLQSYSTPYDYSYL-E*GNQAAD 141
            KV F+TDS  LV+ +K   +   P  I   + + L++L      ++ S++    N  AD
Sbjct: 129 GKVVFKTDSELLVRQVKGIYRVKNPTLIS--LHKKLMTLFKTLPLWEISHVPREENSLAD 186

Query: 140 GLMNKAADTAA 108
            + N+A D+A+
Sbjct: 187 TIANRAIDSAS 197


>ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
 Frame = -3

Query: 521 WCIWQVDKGKINTDGAVRGHPGHAGAGIICRSSATSTIKAISQPLGITTALMAETWALLL 342
           W   Q+   K+N DG+ +G  G A  G + R+     +   ++P+G TT+ +AE  AL  
Sbjct: 35  WKKPQIGWTKLNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAELAALRR 94

Query: 341 AVRTAIDHQWTKVWFETDSINLVQLI-KTKTSPPWYIQAMIEEILLSLQSYSTPYDYSYL 165
            +   +++ W+ VW E DS +LV +I K K       Q  +  I L +            
Sbjct: 95  GLELVLENGWSNVWLEGDSKSLVDIIVKRKQVRCKEAQRQVSHINLIMPELQNCVVTHVF 154

Query: 164 E*GNQAADGL 135
             GN+AAD L
Sbjct: 155 REGNRAADKL 164


>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/128 (27%), Positives = 55/128 (42%)
 Frame = -3

Query: 494 KINTDGAVRGHPGHAGAGIICRSSATSTIKAISQPLGITTALMAETWALLLAVRTAIDHQ 315
           KIN DG+  G P     G + R+  T ++   +Q +G  T   AE  A + A+  +I++ 
Sbjct: 12  KINLDGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEYN 71

Query: 314 WTKVWFETDSINLVQLIKTKTSPPWYIQAMIEEILLSLQSYSTPYDYSYLE*GNQAADGL 135
              +W ETDS  +V+   +    PW ++      L   Q       + + E GN  AD L
Sbjct: 72  LRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHRE-GNAGADSL 130

Query: 134 MNKAADTA 111
                  A
Sbjct: 131 AKNGKSLA 138