BLASTX nr result

ID: Papaver23_contig00016491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016491
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]    59   2e-20
ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu...    57   2e-20
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig...    59   2e-20
ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|2...    55   2e-19
ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein lig...    52   8e-18

>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score = 59.3 bits (142), Expect(3) = 2e-20
 Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
 Frame = -2

Query: 126 GW----SLGFTDRGASDKVMKPEMLNNIRGESFSQISTRLYHSVAV 1
           GW    SLGF DRGASDKVM+P +L+++RG   SQIST LYH+VAV
Sbjct: 400 GWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAV 445



 Score = 47.8 bits (112), Expect(3) = 2e-20
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = -3

Query: 275 GKGYCDVLGQGGEIDKTTPTQLNGMKGHLAV 183
           GKGYC  LG G EIDKTTP  L+ +K HLAV
Sbjct: 348 GKGYCGALGHGDEIDKTTPEILSSLKSHLAV 378



 Score = 37.0 bits (84), Expect(3) = 2e-20
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = -1

Query: 181 RKRKTFVLVVGGSIFGFKWMEF 116
           RKRKTFVLV  GS++GF WM F
Sbjct: 383 RKRKTFVLVDTGSVYGFGWMGF 404


>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 497

 Score = 56.6 bits (135), Expect(3) = 2e-20
 Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
 Frame = -2

Query: 126 GW----SLGFTDRGASDKVMKPEMLNNIRGESFSQISTRLYHSVAV 1
           GW    SLGF DRG SDKVM+P +L+++R    SQIST LYH+VAV
Sbjct: 400 GWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAV 445



 Score = 48.1 bits (113), Expect(3) = 2e-20
 Identities = 21/31 (67%), Positives = 22/31 (70%)
 Frame = -3

Query: 275 GKGYCDVLGQGGEIDKTTPTQLNGMKGHLAV 183
           GKGYC  LG G EIDKT P  LN +K HLAV
Sbjct: 348 GKGYCGALGHGDEIDKTLPEPLNSLKSHLAV 378



 Score = 39.3 bits (90), Expect(3) = 2e-20
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -1

Query: 181 RKRKTFVLVVGGSIFGFKWMEF 116
           RKRKTFVLV GG +FGF WM F
Sbjct: 383 RKRKTFVLVDGGCVFGFGWMGF 404


>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
           product [Vitis vinifera]
          Length = 492

 Score = 59.3 bits (142), Expect(3) = 2e-20
 Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
 Frame = -2

Query: 126 GW----SLGFTDRGASDKVMKPEMLNNIRGESFSQISTRLYHSVAV 1
           GW    SLGF DRGASDKVM+P +L+++RG   SQIST LYH+VAV
Sbjct: 400 GWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAV 445



 Score = 47.8 bits (112), Expect(3) = 2e-20
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = -3

Query: 275 GKGYCDVLGQGGEIDKTTPTQLNGMKGHLAV 183
           GKGYC  LG G EIDKTTP  L+ +K HLAV
Sbjct: 348 GKGYCGALGHGDEIDKTTPEILSSLKSHLAV 378



 Score = 37.0 bits (84), Expect(3) = 2e-20
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = -1

Query: 181 RKRKTFVLVVGGSIFGFKWMEF 116
           RKRKTFVLV  GS++GF WM F
Sbjct: 383 RKRKTFVLVDTGSVYGFGWMGF 404


>ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|222859975|gb|EEE97522.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 54.7 bits (130), Expect(3) = 2e-19
 Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
 Frame = -2

Query: 126 GW----SLGFTDRGASDKVMKPEMLNNIRGESFSQISTRLYHSVAV 1
           GW    SLGF DRG SDKVM+P +L+++R    SQIST LYH+V V
Sbjct: 400 GWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVV 445



 Score = 45.8 bits (107), Expect(3) = 2e-19
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = -3

Query: 275 GKGYCDVLGQGGEIDKTTPTQLNGMKGHLAV 183
           GKGYC  LG G EIDKT P  +N +K HLAV
Sbjct: 348 GKGYCGALGHGDEIDKTLPALVNCLKSHLAV 378



 Score = 40.0 bits (92), Expect(3) = 2e-19
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -1

Query: 181 RKRKTFVLVVGGSIFGFKWMEF 116
           RKRKTFVLV GGS++GF WM F
Sbjct: 383 RKRKTFVLVDGGSVYGFGWMGF 404


>ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score = 52.0 bits (123), Expect(3) = 8e-18
 Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
 Frame = -2

Query: 126 GW----SLGFTDRGASDKVMKPEMLNNIRGESFSQISTRLYHSVAV 1
           GW    SLGF DRG SDKV++P  L+++R    SQIST LYH+V V
Sbjct: 400 GWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVV 445



 Score = 48.1 bits (113), Expect(3) = 8e-18
 Identities = 21/31 (67%), Positives = 22/31 (70%)
 Frame = -3

Query: 275 GKGYCDVLGQGGEIDKTTPTQLNGMKGHLAV 183
           GKGYC  LG G EIDKT P  LN +K HLAV
Sbjct: 348 GKGYCGALGHGDEIDKTIPQPLNSLKNHLAV 378



 Score = 34.7 bits (78), Expect(3) = 8e-18
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = -1

Query: 181 RKRKTFVLVVGGSIFGFKWMEF 116
           RKRKTFVLV  G ++GF WM F
Sbjct: 383 RKRKTFVLVDTGIVYGFGWMGF 404


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