BLASTX nr result

ID: Papaver23_contig00016400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016400
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloro...   171   1e-40
sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, ...   165   4e-39
ref|XP_003542557.1| PREDICTED: triosephosphate isomerase, chloro...   164   7e-39
ref|XP_002529248.1| triosephosphate isomerase, putative [Ricinus...   164   7e-39
gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]         164   1e-38

>ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloroplastic-like isoform 1
           [Vitis vinifera]
          Length = 324

 Score =  171 bits (432), Expect = 1e-40
 Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 STSVASGLRFXXXXXXXXXXXSTTESFFRQIGSNLRVSSG-RKACRGVVAMAGSGKFFVG 198
           S S +S  +F            + + FF    SNLR+SS  RK CRG+VAMAGSGKFFVG
Sbjct: 22  SYSYSSATQFSGLRRSFSNLDHSPQPFF---SSNLRISSSPRKPCRGIVAMAGSGKFFVG 78

Query: 197 GNWKCNGTKESISKLVSDLNSVKLEADVDVVVSPPFVYIDQVKNSLTDRIEISGQNSWIG 18
           GNWKCNGTK+SISKLVSDLNS KLEADVDVVV+PPFVY+DQVKNSLTDRIEIS QNSW+G
Sbjct: 79  GNWKCNGTKDSISKLVSDLNSAKLEADVDVVVAPPFVYLDQVKNSLTDRIEISAQNSWVG 138

Query: 17  KGGAF 3
           KGGAF
Sbjct: 139 KGGAF 143


>sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM;
           Short=Triose-phosphate isomerase; Flags: Precursor
           gi|806312|gb|AAA66289.1| triosephosphate isomerase,
           chloroplast isozyme [Spinacia oleracea]
          Length = 322

 Score =  165 bits (418), Expect = 4e-39
 Identities = 93/143 (65%), Positives = 104/143 (72%), Gaps = 15/143 (10%)
 Frame = -2

Query: 386 MAMVSTSVAS--------------GLRFXXXXXXXXXXXSTTESFFRQIGSNLRVSSGRK 249
           MA+VSTS+AS              GLR            ST  SFF+ + S+LR+SS  +
Sbjct: 1   MAVVSTSLASQITNPNSAVSTQFSGLR--RSFLKLENSVSTQSSFFQNVDSHLRLSSSSR 58

Query: 248 AC-RGVVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNSVKLEADVDVVVSPPFVYIDQV 72
            C RGVVAMAGSGKFFVGGNWKCNGTKESI+KLVSDLNS  LEADVDVVV+PPFVYIDQV
Sbjct: 59  RCPRGVVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQV 118

Query: 71  KNSLTDRIEISGQNSWIGKGGAF 3
           K+SLT R+EIS QN WIGKGGAF
Sbjct: 119 KSSLTGRVEISAQNCWIGKGGAF 141


>ref|XP_003542557.1| PREDICTED: triosephosphate isomerase, chloroplastic-like [Glycine
           max]
          Length = 305

 Score =  164 bits (416), Expect = 7e-39
 Identities = 80/99 (80%), Positives = 85/99 (85%)
 Frame = -2

Query: 299 SFFRQIGSNLRVSSGRKACRGVVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNSVKLEA 120
           SFFR + S L   S  K  RGVVAMAGSGKFFVGGNWKCNGTK+SISKLVSDLNS  LE 
Sbjct: 26  SFFRNVHSTLSFPSSSKPSRGVVAMAGSGKFFVGGNWKCNGTKDSISKLVSDLNSATLEP 85

Query: 119 DVDVVVSPPFVYIDQVKNSLTDRIEISGQNSWIGKGGAF 3
           DVDVVV+PPFVYIDQVKNS+TDRIEIS QNSW+GKGGAF
Sbjct: 86  DVDVVVAPPFVYIDQVKNSITDRIEISAQNSWVGKGGAF 124


>ref|XP_002529248.1| triosephosphate isomerase, putative [Ricinus communis]
           gi|223531284|gb|EEF33126.1| triosephosphate isomerase,
           putative [Ricinus communis]
          Length = 313

 Score =  164 bits (416), Expect = 7e-39
 Identities = 87/132 (65%), Positives = 99/132 (75%), Gaps = 4/132 (3%)
 Frame = -2

Query: 386 MAMVSTSVASGLRFXXXXXXXXXXXST---TESFFRQIGSNLR-VSSGRKACRGVVAMAG 219
           MAM+STS++   +F            T   ++SF R   S LR +SS RK  R VVAMAG
Sbjct: 1   MAMLSTSLSGPSQFSGLRQSCPKLLETHSLSQSFLRHFNSQLRSISSSRKPSRHVVAMAG 60

Query: 218 SGKFFVGGNWKCNGTKESISKLVSDLNSVKLEADVDVVVSPPFVYIDQVKNSLTDRIEIS 39
           +G FFVGGNWKCNGTKESISKLVSDLN  KLEADVDVVV+PPF+YIDQVK+SLTDRIEIS
Sbjct: 61  TGTFFVGGNWKCNGTKESISKLVSDLNDAKLEADVDVVVAPPFIYIDQVKSSLTDRIEIS 120

Query: 38  GQNSWIGKGGAF 3
            QNSW+ KGGAF
Sbjct: 121 AQNSWVSKGGAF 132


>gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]
          Length = 307

 Score =  164 bits (415), Expect = 1e-38
 Identities = 78/101 (77%), Positives = 87/101 (86%)
 Frame = -2

Query: 305 TESFFRQIGSNLRVSSGRKACRGVVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNSVKL 126
           ++SF + I S LR++S RK CR V AMAGSGKFFVGGNWKCNGTK+SI+KLVSDLNS KL
Sbjct: 26  SQSFLQHINSQLRLASSRKPCRAVTAMAGSGKFFVGGNWKCNGTKDSITKLVSDLNSAKL 85

Query: 125 EADVDVVVSPPFVYIDQVKNSLTDRIEISGQNSWIGKGGAF 3
           E DVDVVVSPPFVY+DQV  SLT RIE+S QNSWIGKGGAF
Sbjct: 86  ETDVDVVVSPPFVYLDQVTASLTSRIEVSAQNSWIGKGGAF 126


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