BLASTX nr result

ID: Papaver23_contig00016359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016359
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803...   189   2e-45
ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glyci...   188   4e-45
gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p...   185   2e-44
ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   183   9e-44
ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-43

>ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803118 [Glycine max]
          Length = 196

 Score =  189 bits (480), Expect = 2e-45
 Identities = 103/197 (52%), Positives = 136/197 (69%), Gaps = 21/197 (10%)
 Frame = +1

Query: 7   MPGNRDCTVYVGNLDERVSERVLYDILIQAGRIVDLHIPRDRESNRPKGYAFAEYETEEI 186
           M GN +C+VY+GNLDERV++RVLYDILIQAGR+VDLHIP+D+ES +PKG+AFAEYETEEI
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 187 ADYAVRLFTGLVTLYNRSLKFAISGQDKTTP-----------LSSKPKPQPLIYSHSE-- 327
           ADYAVRLF+GL+TLYNR+LKFAISG+DKTT             S +P+P P+  ++SE  
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAIAPTLNSSQRPRPYPVPINNSENF 120

Query: 328 ---TRLSS---FTASDIHQELTPPGVI--QSNGYGLELSSKNYDISRQVLGAAEESIRRT 483
               RLS+   F+   ++     P  +  QS+GYG   S  NY+ SR+  GA  +SI R+
Sbjct: 121 QHPARLSTPDRFSDYPVNNSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLDSISRS 180

Query: 484 NSSRKMYDSKHPVIFHS 534
            S  + +D   P+ + S
Sbjct: 181 RS--RHFDKSSPISYPS 195


>ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glycine max]
          Length = 186

 Score =  188 bits (477), Expect = 4e-45
 Identities = 101/184 (54%), Positives = 130/184 (70%), Gaps = 21/184 (11%)
 Frame = +1

Query: 7   MPGNRDCTVYVGNLDERVSERVLYDILIQAGRIVDLHIPRDRESNRPKGYAFAEYETEEI 186
           M GN +C+VY+GNLDERV++RVLYDILIQAGR+VDLHIP+D+ES +PKG+AFAEYETEEI
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 187 ADYAVRLFTGLVTLYNRSLKFAISGQDKTTP-----------LSSKPKPQPLIYSHSE-- 327
           ADYAVRLF+GL+TLYNR+LKFAISG+DKTT             S +P+P P+  ++SE  
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSENF 120

Query: 328 ---TRLSS---FTASDIHQELTPPGVI--QSNGYGLELSSKNYDISRQVLGAAEESIRRT 483
               RLS+   F+   ++     P  +  QS+GYG   S  NY+ SR+  GA  +SI R+
Sbjct: 121 QHSARLSTPDRFSDHPVNYSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLDSISRS 180

Query: 484 NSSR 495
            S R
Sbjct: 181 RSRR 184


>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
          Length = 194

 Score =  185 bits (470), Expect = 2e-44
 Identities = 101/195 (51%), Positives = 132/195 (67%), Gaps = 19/195 (9%)
 Frame = +1

Query: 7   MPGNRDCTVYVGNLDERVSERVLYDILIQAGRIVDLHIPRDRESNRPKGYAFAEYETEEI 186
           M     C+VY+GNLDERVS+RVLYDILIQAGR+VDL+IPRD+E++RPKG+AFAEYETEEI
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 187 ADYAVRLFTGLVTLYNRSLKFAISGQDK--------TTPLSSKPKPQPLIYSHSET---- 330
           ADYAV+LF+GLVTLYNR+LKFAISGQDK        T+  S +PKP P+ +++ E     
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDKPSSAAITPTSNSSLEPKPHPVPFNNMENSQHS 120

Query: 331 -------RLSSFTASDIHQELTPPGVIQSNGYGLELSSKNYDISRQVLGAAEESIRRTNS 489
                  RL++   +      +   + Q N Y  +L   +YD SR+V GA  +SI RT S
Sbjct: 121 MGLRTPCRLAAHPVNYAQVPASSDTLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRTRS 180

Query: 490 SRKMYDSKHPVIFHS 534
             + YDS +P+ + S
Sbjct: 181 --RYYDSSNPITYPS 193


>ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|297734803|emb|CBI17037.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  183 bits (465), Expect = 9e-44
 Identities = 100/195 (51%), Positives = 132/195 (67%), Gaps = 19/195 (9%)
 Frame = +1

Query: 7   MPGNRDCTVYVGNLDERVSERVLYDILIQAGRIVDLHIPRDRESNRPKGYAFAEYETEEI 186
           M     C+VY+GNLDERVS+RVLYDILIQAGR+VDL+IPRD+E++RPKG+AFAEYETEEI
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 187 ADYAVRLFTGLVTLYNRSLKFAISGQDK--------TTPLSSKPKPQPLIYSHSET---- 330
           ADYAV+LF+GLVTLYNR+LKFAISGQDK        T+  S +PKP P+ +++ E     
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDKPSSAAITPTSNSSLEPKPHPVPFNNMENSQHS 120

Query: 331 -------RLSSFTASDIHQELTPPGVIQSNGYGLELSSKNYDISRQVLGAAEESIRRTNS 489
                  RL++   +      +   + Q N Y  +L   +YD SR+V GA  +SI RT S
Sbjct: 121 MGLRTPCRLAAHPVNYAQVPASSDTLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRTRS 180

Query: 490 SRKMYDSKHPVIFHS 534
             + +DS +P+ + S
Sbjct: 181 --RYHDSSNPITYPS 193


>ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|222870991|gb|EEF08122.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  182 bits (461), Expect = 3e-43
 Identities = 102/196 (52%), Positives = 137/196 (69%), Gaps = 24/196 (12%)
 Frame = +1

Query: 7   MPGNRDCTVYVGNLDERVSERVLYDILIQAGRIVDLHIPRDRESNRPKGYAFAEYETEEI 186
           M G   C++Y+GNLDERVS+RVLYDILIQAGR+VDLHIPRDRE+++PKGYAFAEYETEEI
Sbjct: 1   MSGPSSCSIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETEEI 60

Query: 187 ADYAVRLFTGLVTLYNRSLKFAISGQDK--------TTPL---SSKPKP-QPLIYSHSE- 327
           ADYAV+LF+GLVTLYNR+LKFAISGQDK          P+   S++ +P  P++ ++ E 
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFAISGQDKLAQNNLNGVVPVPNSSNRQRPSHPVLINNLEI 120

Query: 328 ----------TRLSSFTASDIHQELTPPGVIQ-SNGYGLELSSKNYDISRQVLGAAEESI 474
                     +R+S++ A+D    L PPGV   SNGYG   +  + D  R++ G+A  +I
Sbjct: 121 PNHSMRLSAPSRVSAYPAND---SLAPPGVTNLSNGYGSNSNGNSNDSDRRLFGSAVNAI 177

Query: 475 RRTNSSRKMYDSKHPV 522
            R+ S  + YD+ +P+
Sbjct: 178 SRSRS--RWYDTSNPM 191


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