BLASTX nr result

ID: Papaver23_contig00016228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016228
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4...   263   1e-68
ref|XP_002523094.1| gamma-tubulin complex component, putative [R...   254   5e-66
ref|XP_004139048.1| PREDICTED: gamma-tubulin complex component 4...   252   3e-65
ref|XP_002320339.1| tubulin gamma complex-associated protein [Po...   251   4e-65
ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4...   247   8e-64

>ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis
           vinifera] gi|297743902|emb|CBI36872.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score =  263 bits (672), Expect = 1e-68
 Identities = 130/165 (78%), Positives = 143/165 (86%)
 Frame = +3

Query: 3   RDLSWIRSTNSSPSLPQQLVLVRGKTKNPSVYRRAIANGIVEILSVYRSVVLNVEQKLLS 182
           RDLSWIRSTN SP L +   L++GK +  S Y RAIANGIVEILSVYRS VL++EQ LLS
Sbjct: 81  RDLSWIRSTNVSP-LSRTSELLKGKPQKSSAYGRAIANGIVEILSVYRSAVLHIEQILLS 139

Query: 183 DPMPILATITQGLNKFFVLLPPLHELIVEIERDDIQGGKLLNLLHKRCHCGVPELQACFQ 362
           DP PILAT+ QGLNKFFVLLPPL+ELI+EIERDDI GG+LLNLLHKRCHCGVPELQAC Q
Sbjct: 140 DPTPILATVIQGLNKFFVLLPPLYELILEIERDDICGGQLLNLLHKRCHCGVPELQACIQ 199

Query: 363 RLLWHGHQVMYNQLASWMIYGIIQDQHGEFFIRRQEDMIIGSEES 497
           RLLWHGHQVMYNQLASWM+YGI+QDQHGEFFIRRQED  +  E S
Sbjct: 200 RLLWHGHQVMYNQLASWMVYGILQDQHGEFFIRRQEDRDVEHEAS 244


>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223537656|gb|EEF39279.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 756

 Score =  254 bits (649), Expect = 5e-66
 Identities = 122/157 (77%), Positives = 137/157 (87%)
 Frame = +3

Query: 3   RDLSWIRSTNSSPSLPQQLVLVRGKTKNPSVYRRAIANGIVEILSVYRSVVLNVEQKLLS 182
           R+LSWIRSTN SP      +     T+  SVYRRAIANGIVEILSVYRS VL++EQKLLS
Sbjct: 81  RNLSWIRSTNVSPLSRANELSSNNNTQKQSVYRRAIANGIVEILSVYRSAVLHIEQKLLS 140

Query: 183 DPMPILATITQGLNKFFVLLPPLHELIVEIERDDIQGGKLLNLLHKRCHCGVPELQACFQ 362
           + +PILAT+TQGLNKFFVLLPPL+EL++EIERDDI+GG+LLNLLHKR HCGVPELQ C Q
Sbjct: 141 ETVPILATVTQGLNKFFVLLPPLYELVLEIERDDIRGGQLLNLLHKRSHCGVPELQTCIQ 200

Query: 363 RLLWHGHQVMYNQLASWMIYGIIQDQHGEFFIRRQED 473
           RLLWHGHQVMYNQLASWM+YGI+QDQHGEFFI RQED
Sbjct: 201 RLLWHGHQVMYNQLASWMVYGILQDQHGEFFITRQED 237


>ref|XP_004139048.1| PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis
           sativus]
          Length = 754

 Score =  252 bits (643), Expect = 3e-65
 Identities = 121/157 (77%), Positives = 138/157 (87%)
 Frame = +3

Query: 3   RDLSWIRSTNSSPSLPQQLVLVRGKTKNPSVYRRAIANGIVEILSVYRSVVLNVEQKLLS 182
           R+LSWIRS N S SL       + K +NPSVYRRAIANGIVEILS+YRS VL+VEQKLLS
Sbjct: 82  RNLSWIRSGNES-SLANSTESSKDKIENPSVYRRAIANGIVEILSIYRSAVLHVEQKLLS 140

Query: 183 DPMPILATITQGLNKFFVLLPPLHELIVEIERDDIQGGKLLNLLHKRCHCGVPELQACFQ 362
           + +PILA +TQGL+KFFVL PPLH+LI EIERDDI+GG+LLNLLHKRCHCGVPELQ C Q
Sbjct: 141 EMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQLLNLLHKRCHCGVPELQTCIQ 200

Query: 363 RLLWHGHQVMYNQLASWMIYGIIQDQHGEFFIRRQED 473
           RLLWHGHQVMYNQLASWM+YG++QD+HGEFFIRRQ+D
Sbjct: 201 RLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDD 237


>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222861112|gb|EEE98654.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 728

 Score =  251 bits (641), Expect = 4e-65
 Identities = 122/157 (77%), Positives = 138/157 (87%)
 Frame = +3

Query: 3   RDLSWIRSTNSSPSLPQQLVLVRGKTKNPSVYRRAIANGIVEILSVYRSVVLNVEQKLLS 182
           R+LSWIRS N +  L  + V         SVYRRAIANGIVEILSVYRS VL++EQKLLS
Sbjct: 76  RNLSWIRSANPNNELSNKNV-----QDKQSVYRRAIANGIVEILSVYRSAVLHIEQKLLS 130

Query: 183 DPMPILATITQGLNKFFVLLPPLHELIVEIERDDIQGGKLLNLLHKRCHCGVPELQACFQ 362
           + +PILATITQGLNKFFVLLPPL+EL++EIERDDI+GG+LLNLLHKRCHCGVPELQ+C Q
Sbjct: 131 ESIPILATITQGLNKFFVLLPPLYELVLEIERDDIRGGQLLNLLHKRCHCGVPELQSCIQ 190

Query: 363 RLLWHGHQVMYNQLASWMIYGIIQDQHGEFFIRRQED 473
           RLLWHGHQVMYNQLASW++YGI+QDQHGEFFIRRQED
Sbjct: 191 RLLWHGHQVMYNQLASWVVYGILQDQHGEFFIRRQED 227


>ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max]
          Length = 732

 Score =  247 bits (630), Expect = 8e-64
 Identities = 120/165 (72%), Positives = 138/165 (83%)
 Frame = +3

Query: 3   RDLSWIRSTNSSPSLPQQLVLVRGKTKNPSVYRRAIANGIVEILSVYRSVVLNVEQKLLS 182
           RDLSWIRS N+ P           K +  SVYRRA+A+GIVEILSVYRS VL++EQKLLS
Sbjct: 74  RDLSWIRSANAKPL---------EKKEKGSVYRRALASGIVEILSVYRSAVLHIEQKLLS 124

Query: 183 DPMPILATITQGLNKFFVLLPPLHELIVEIERDDIQGGKLLNLLHKRCHCGVPELQACFQ 362
           + MPILAT+TQGLNKF  LLPPL+ELI+EIERDDI+GG+LLNLLHKRCHCGVPELQ C Q
Sbjct: 125 ETMPILATVTQGLNKFLCLLPPLYELILEIERDDIRGGQLLNLLHKRCHCGVPELQTCMQ 184

Query: 363 RLLWHGHQVMYNQLASWMIYGIIQDQHGEFFIRRQEDMIIGSEES 497
           RLLWHGHQVMYNQLASW++YGI+QDQ+GEFFIRRQED  + +  S
Sbjct: 185 RLLWHGHQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSS 229


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