BLASTX nr result

ID: Papaver23_contig00015846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00015846
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    70   6e-14
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    63   2e-13
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...    65   1e-12
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...    65   1e-12
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    62   2e-12

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 70.1 bits (170), Expect(2) = 6e-14
 Identities = 37/119 (31%), Positives = 57/119 (47%)
 Frame = +1

Query: 148 ISKCITSHFQTISTTVNPKIDDNMINLIPSCITQSDNDMLCQTSLETEIKQVLFSMEPNK 327
           I     S+FQ + TT NP++ D  +  +   IT   ND+L   + E E++  LF + P K
Sbjct: 169 IQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEK 228

Query: 328 SXXXXXXXXXXXXQNWEIIGTDLVKMIQIFFISGKISK*MNASFISLIPKTLNPITPAE 504
           +            ++W II +DL+ ++  F   G   K +N + I LIPKT  P    E
Sbjct: 229 APGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTE 287



 Score = 32.0 bits (71), Expect(2) = 6e-14
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +3

Query: 9   KSRDQNIALGDRNTKYFHNKAK*RFRRNRI 98
           KSR   + LGD N+K+FH   K R  RNRI
Sbjct: 123 KSRSLWMKLGDNNSKFFHALTKQRRARNRI 152


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 63.2 bits (152), Expect(2) = 2e-13
 Identities = 32/107 (29%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = +1

Query: 160 ITSHFQTISTTVNPKI-DDNMINLIPSCITQSDNDMLCQTSLETEIKQVLFSMEPNKSXX 336
           + ++FQ I +  N  I +D +++ IPS ++  DN+ L +  L  E+K  +F++  + +  
Sbjct: 402 VLNYFQAIFSVDNSCIQNDLVVDTIPSLVSNVDNNSLLRLPLWGEVKNAVFTLNGDGAPG 461

Query: 337 XXXXXXXXXXQNWEIIGTDLVKMIQIFFISGKISK*MNASFISLIPK 477
                       W+I+G D+++ +Q FFISG++++ +N++ I LIPK
Sbjct: 462 PNGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVLIPK 508



 Score = 37.0 bits (84), Expect(2) = 2e-13
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +3

Query: 3   KDKSRDQNIALGDRNTKYFHNKAK*RFRRNRIEILK 110
           ++K RDQ    GDRNT YFH  +K R  +N I  L+
Sbjct: 351 REKLRDQRFIHGDRNTAYFHRISKVRATKNTISFLQ 386


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 65.1 bits (157), Expect(2) = 1e-12
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +1

Query: 163 TSHFQTISTTVNPKIDDNMI-NLIPSCITQSDNDMLCQTSLETEIKQVLFSMEPNKSXXX 339
           T +FQ + T  +P ID + + +LI   +T + N+ LC+T  E EI   LF + P K+   
Sbjct: 469 TEYFQRLFTA-DPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGP 527

Query: 340 XXXXXXXXXQNWEIIGTDLVKMIQIFFISGKISK*MNASFISLIPKTLNP 489
                    +NW I+  D+V+ +Q FF SG +   +N + I LIPKT  P
Sbjct: 528 DGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQP 577



 Score = 32.7 bits (73), Expect(2) = 1e-12
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +3

Query: 9   KSRDQNIALGDRNTKYFHNKAK*RFRRNRIEILK 110
           +SR   +  GDRNT++FH+KA  R ++N+I  L+
Sbjct: 418 RSRIAWLKEGDRNTRFFHSKAVWRAKKNKITKLR 451


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score = 65.1 bits (157), Expect(2) = 1e-12
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +1

Query: 163 TSHFQTISTTVNPKIDDNMI-NLIPSCITQSDNDMLCQTSLETEIKQVLFSMEPNKSXXX 339
           T +FQ + T  +P ID + + +LI   +T + N+ LC+T  E EI   LF + P K+   
Sbjct: 469 TEYFQRLFTA-DPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGP 527

Query: 340 XXXXXXXXXQNWEIIGTDLVKMIQIFFISGKISK*MNASFISLIPKTLNP 489
                    +NW I+  D+V+ +Q FF SG +   +N + I LIPKT  P
Sbjct: 528 DGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQP 577



 Score = 32.7 bits (73), Expect(2) = 1e-12
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +3

Query: 9   KSRDQNIALGDRNTKYFHNKAK*RFRRNRIEILK 110
           +SR   +  GDRNT++FH+KA  R ++N+I  L+
Sbjct: 418 RSRIAWLKEGDRNTRFFHSKAVWRAKKNKITKLR 451


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 62.4 bits (150), Expect(2) = 2e-12
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = +1

Query: 148  ISKCITSHFQTISTTVNPKIDDNMI-NLIPSCITQSDNDMLCQTSLETEIKQVLFSMEPN 324
            + +  T +FQ + T  +P ID + + +L+   +T + N+ LC+T  E EI   LF + P 
Sbjct: 921  LERMATEYFQRLFTA-DPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANALFQIGPL 979

Query: 325  KSXXXXXXXXXXXXQNWEIIGTDLVKMIQIFFISGKISK*MNASFISLIPKTLNP 489
            K+            +NW I+  D+V+ +Q FF  G +   +N + I LIPKT  P
Sbjct: 980  KAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQP 1034



 Score = 34.7 bits (78), Expect(2) = 2e-12
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +3

Query: 9   KSRDQNIALGDRNTKYFHNKAK*RFRRNRIEILK 110
           +SR   +  GDRNT++FHNKA  R ++N+I  L+
Sbjct: 875 RSRIAWLKEGDRNTRFFHNKAVWRAKKNKITKLR 908


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