BLASTX nr result

ID: Papaver23_contig00015803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00015803
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   222   3e-56
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              222   3e-56
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   219   2e-55
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   219   2e-55
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   219   2e-55

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  222 bits (565), Expect = 3e-56
 Identities = 107/174 (61%), Positives = 132/174 (75%)
 Frame = -3

Query: 523 PPNVGKSLLIKSLVKYFNSVELNDLQVPITIRIGGTSRLQFVECPDDINAMIDASKYADL 344
           PP VGKSLLIKSLVK++    L++++ PITI  G   RLQFVECP+DIN MIDA+K+ADL
Sbjct: 94  PPQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADL 153

Query: 343 VLLLVDASYGFEAETFEFLNILQTHGFSKVMGVFTHLDEFNDENKLKETKECLQDHFWTE 164
            LLL+D SYGFE ETFEFLNILQ HGF KVMGV THLD+F D  KLK+TK+ L+  FWTE
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTE 213

Query: 163 ICQGARIYNLTGLDHGLYKMQELQKLVEDIKMIEIPTLSWRVARPYVLVDRFED 2
           I  GA+++ L+GL HG Y  +E+  L   I +++   LSWR + PY+LVDRFED
Sbjct: 214 IYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFED 267


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  222 bits (565), Expect = 3e-56
 Identities = 107/174 (61%), Positives = 132/174 (75%)
 Frame = -3

Query: 523 PPNVGKSLLIKSLVKYFNSVELNDLQVPITIRIGGTSRLQFVECPDDINAMIDASKYADL 344
           PP VGKSLLIKSLVK++    L++++ PITI  G   RLQFVECP+DIN MIDA+K+ADL
Sbjct: 94  PPQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADL 153

Query: 343 VLLLVDASYGFEAETFEFLNILQTHGFSKVMGVFTHLDEFNDENKLKETKECLQDHFWTE 164
            LLL+D SYGFE ETFEFLNILQ HGF KVMGV THLD+F D  KLK+TK+ L+  FWTE
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTE 213

Query: 163 ICQGARIYNLTGLDHGLYKMQELQKLVEDIKMIEIPTLSWRVARPYVLVDRFED 2
           I  GA+++ L+GL HG Y  +E+  L   I +++   LSWR + PY+LVDRFED
Sbjct: 214 IYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFED 267


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  219 bits (557), Expect = 2e-55
 Identities = 107/174 (61%), Positives = 130/174 (74%)
 Frame = -3

Query: 523 PPNVGKSLLIKSLVKYFNSVELNDLQVPITIRIGGTSRLQFVECPDDINAMIDASKYADL 344
           PP VGKSLLIKSL+K++    L +++ PITI  G   RLQFVECP+DIN MIDA+KYADL
Sbjct: 91  PPQVGKSLLIKSLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKYADL 150

Query: 343 VLLLVDASYGFEAETFEFLNILQTHGFSKVMGVFTHLDEFNDENKLKETKECLQDHFWTE 164
            LLL+D SYGFE ETFEFLNILQ HGF KVMGV THLD F D  KL++TK+ L+  FWTE
Sbjct: 151 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTE 210

Query: 163 ICQGARIYNLTGLDHGLYKMQELQKLVEDIKMIEIPTLSWRVARPYVLVDRFED 2
           I  GA+++ L+GL HG Y  +E+  L   I +++   LSWR + PYVLVDRFED
Sbjct: 211 IYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFED 264


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  219 bits (557), Expect = 2e-55
 Identities = 107/174 (61%), Positives = 130/174 (74%)
 Frame = -3

Query: 523 PPNVGKSLLIKSLVKYFNSVELNDLQVPITIRIGGTSRLQFVECPDDINAMIDASKYADL 344
           PP VGKSLLIKSL+K++    L +++ PITI  G   RLQFVECP+DIN MIDA+KYADL
Sbjct: 91  PPQVGKSLLIKSLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKYADL 150

Query: 343 VLLLVDASYGFEAETFEFLNILQTHGFSKVMGVFTHLDEFNDENKLKETKECLQDHFWTE 164
            LLL+D SYGFE ETFEFLNILQ HGF KVMGV THLD F D  KL++TK+ L+  FWTE
Sbjct: 151 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTE 210

Query: 163 ICQGARIYNLTGLDHGLYKMQELQKLVEDIKMIEIPTLSWRVARPYVLVDRFED 2
           I  GA+++ L+GL HG Y  +E+  L   I +++   LSWR + PYVLVDRFED
Sbjct: 211 IYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFED 264


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  219 bits (557), Expect = 2e-55
 Identities = 107/174 (61%), Positives = 130/174 (74%)
 Frame = -3

Query: 523 PPNVGKSLLIKSLVKYFNSVELNDLQVPITIRIGGTSRLQFVECPDDINAMIDASKYADL 344
           PP VGKSLLIKSL+K++    L +++ PITI  G   RLQFVECP+DIN MIDA+KYADL
Sbjct: 91  PPQVGKSLLIKSLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKYADL 150

Query: 343 VLLLVDASYGFEAETFEFLNILQTHGFSKVMGVFTHLDEFNDENKLKETKECLQDHFWTE 164
            LLL+D SYGFE ETFEFLNILQ HGF KVMGV THLD F D  KL++TK+ L+  FWTE
Sbjct: 151 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTE 210

Query: 163 ICQGARIYNLTGLDHGLYKMQELQKLVEDIKMIEIPTLSWRVARPYVLVDRFED 2
           I  GA+++ L+GL HG Y  +E+  L   I +++   LSWR + PYVLVDRFED
Sbjct: 211 IYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFED 264


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