BLASTX nr result

ID: Papaver23_contig00015760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00015760
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16571.3| unnamed protein product [Vitis vinifera]              231   1e-58
ref|XP_002523390.1| nuclear pore complex protein nup153, putativ...   214   2e-53
ref|XP_003552784.1| PREDICTED: uncharacterized protein LOC100794...   197   2e-48
ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis th...   197   3e-48
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...   197   3e-48

>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
          Length = 1685

 Score =  231 bits (590), Expect = 1e-58
 Identities = 127/241 (52%), Positives = 168/241 (69%), Gaps = 5/241 (2%)
 Frame = +1

Query: 52   INQSGGQRTSVDAGKFESVPTIRSSQLSQGSSAPGKSFNFKLQPTQEASKVPSSPVLLAS 231
            I+QS GQR S+ AG  E + +   SQLS   + P KS N+K  P +E  + P     L S
Sbjct: 686  ISQSRGQRGSMVAGNVEPISSTLGSQLSMQENFPAKSPNYKSYPPKENYRTPPLQGQLNS 745

Query: 232  APALSKHLGSVNEMAGDLDNLLQSIEKEGGYRDNCT--QKSSVLSLEQELEKLSWKCREW 405
             P LSK  G+V EMA +LD LLQ IE  GG+RD CT  QKSSV+ LEQ +  LS  CR W
Sbjct: 746  EPNLSKQFGNVKEMAKELDTLLQCIEGPGGFRDACTIFQKSSVMELEQGIGTLSENCRMW 805

Query: 406  RNTMEERLEEIQHLFDKTVQVLSRQIYIEGFVKQSSDSQYQDLLNRQKLSPELEQKRQRM 585
            R+ ++++  EI HL DKTVQVL+R++Y++G VKQ++DS+Y DL +RQKL+ ELE KR+ +
Sbjct: 806  RSIIDQQHGEIHHLLDKTVQVLARKVYMQGIVKQATDSRYWDLWSRQKLASELELKRRNI 865

Query: 586  LKVNQELTNQLIQLERHFNTLELDKFDK---TTVGYSASRTILEPSRHSQSLYSLYNTVN 756
            LK+NQ+LTNQLI+LERHFN +EL+KF +     VG  A ++   PSRH QSL+SL+NT+N
Sbjct: 866  LKINQDLTNQLIELERHFNAIELNKFGENGGNHVGRRALQSRSGPSRHMQSLHSLHNTMN 925

Query: 757  S 759
            S
Sbjct: 926  S 926


>ref|XP_002523390.1| nuclear pore complex protein nup153, putative [Ricinus communis]
            gi|223537340|gb|EEF38969.1| nuclear pore complex protein
            nup153, putative [Ricinus communis]
          Length = 1824

 Score =  214 bits (545), Expect = 2e-53
 Identities = 127/259 (49%), Positives = 168/259 (64%), Gaps = 16/259 (6%)
 Frame = +1

Query: 31   PVHSSANINQSGGQRTSV----------DAGKFESVPTIRSSQL-SQGSSAPGKSFNFKL 177
            P H   NI  +     SV            G  + +P+IRSSQL SQ S A G+S N   
Sbjct: 669  PFHLKGNIGDTPSANFSVRPTHTVVQKAKTGMIDLLPSIRSSQLPSQESLALGRSGNRWP 728

Query: 178  QPTQEASKVPSSPVLLASAPALSKHLGSVNEMAGDLDNLLQSIEKEGGYRDNCT--QKSS 351
              +++A K PS   L  S P LS+  G++ EMA +LD+LL+ IE+ GG++D CT  Q+ S
Sbjct: 729  YSSKDAHKAPS---LSKSEPYLSRQFGNIKEMAKELDSLLECIEEPGGFKDACTISQRGS 785

Query: 352  VLSLEQELEKLSWKCREWRNTMEERLEEIQHLFDKTVQVLSRQIYIEGFVKQSSDSQYQD 531
            V +LE+ ++ LS KC  W++ M+E+L E+QHL DKTVQVL+R+IY++G VKQ+SDS+Y +
Sbjct: 786  VEALEERMQTLSEKCITWKSMMDEQLGEVQHLLDKTVQVLARKIYMDGIVKQASDSRYWE 845

Query: 532  LLNRQKLSPELEQKRQRMLKVNQELTNQLIQLERHFNTLELDKFDK---TTVGYSASRTI 702
            L NRQKL  E E KR+ +LK+NQ LTNQLI LERHFNTLEL KFD+      G    ++ 
Sbjct: 846  LWNRQKLGSEFELKRRHILKLNQVLTNQLIDLERHFNTLELHKFDENGGVPKGRREFQSR 905

Query: 703  LEPSRHSQSLYSLYNTVNS 759
              PSR  QSL+SLYNT NS
Sbjct: 906  HGPSRQIQSLHSLYNTTNS 924


>ref|XP_003552784.1| PREDICTED: uncharacterized protein LOC100794048 [Glycine max]
          Length = 1825

 Score =  197 bits (501), Expect = 2e-48
 Identities = 110/247 (44%), Positives = 166/247 (67%), Gaps = 5/247 (2%)
 Frame = +1

Query: 34   VHSSANINQSGGQRTSVDAGKFESVPTIRSSQLSQGSSAPGKSFNFKLQPTQEASKVPSS 213
            + S++ + QSGGQ +++ AG  + +    S   S G++A  KS   K  P+ E    PS 
Sbjct: 742  IDSASRLVQSGGQLSTLGAGNMQPILNSSSHFSSDGNTAAIKSSARKFLPSNEQHGTPSK 801

Query: 214  PVLLASAPALSKHLGSVNEMAGDLDNLLQSIEKEGGYRDNCTQ--KSSVLSLEQELEKLS 387
              + +S   LSK  G++NEM  +LD LL+SIE+ GG+RD CT+  +SS+ ++EQ ++ LS
Sbjct: 802  LGIFSSD--LSKQFGNINEMTKELDLLLKSIEEAGGFRDACTRSLRSSIEAVEQGMDALS 859

Query: 388  WKCREWRNTMEERLEEIQHLFDKTVQVLSRQIYIEGFVKQSSDSQYQDLLNRQKLSPELE 567
             KC+     ++E  EE+ +L +KT++ ++R+IY+EG  KQ+SDS+Y DL NRQKL+ ELE
Sbjct: 860  KKCKILTCQVDEHHEEVHYLLNKTIRAMARKIYMEGIYKQASDSRYWDLWNRQKLNSELE 919

Query: 568  QKRQRMLKVNQELTNQLIQLERHFNTLELDKFDK---TTVGYSASRTILEPSRHSQSLYS 738
             KRQ +L +NQ+LT QLI+LERHFN LEL+KF +     +G+  S+    PSRH+ SL+S
Sbjct: 920  LKRQHILSLNQDLTYQLIELERHFNALELNKFSQYGGRCLGHGPSQNRYGPSRHTLSLHS 979

Query: 739  LYNTVNS 759
            L+N+V+S
Sbjct: 980  LHNSVSS 986


>ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195142|gb|AEE33263.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1819

 Score =  197 bits (500), Expect = 3e-48
 Identities = 111/249 (44%), Positives = 165/249 (66%), Gaps = 7/249 (2%)
 Frame = +1

Query: 34   VHSSANINQSGGQRTSVDAG--KFESVPTIRSSQLSQGSSAPGKSFNFKLQPTQEASKVP 207
            V + +N++   GQ    + G  K E +P+IR+SQLSQ   +     +F+   + +  K P
Sbjct: 661  VSALSNLSPLLGQNQDTNEGVEKIEPIPSIRASQLSQQVKS-----SFEKSASHQQHKTP 715

Query: 208  SSPVLLASAPALSKHLGSVNEMAGDLDNLLQSIEKEGGYRDNCT--QKSSVLSLEQELEK 381
             S   L     +S    ++NEMA ++D LLQSIE  GG++D+C    KS+V  LEQ LE 
Sbjct: 716  LSTGPLRLEHNMSNQPSNINEMAREMDTLLQSIEGPGGFKDSCAFILKSNVEELEQGLES 775

Query: 382  LSWKCREWRNTMEERLEEIQHLFDKTVQVLSRQIYIEGFVKQSSDSQYQDLLNRQKLSPE 561
            L+ KC+ W++T+ E+  EIQHL DKT+QVL+++ Y+EG  KQ++D+QY  L NRQKL+PE
Sbjct: 776  LAGKCQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPE 835

Query: 562  LEQKRQRMLKVNQELTNQLIQLERHFNTLELDKFDKTTVGYSASRTI---LEPSRHSQSL 732
            LE KRQ ++K+N++LT+QLI+LER+FN LELD++++      A R +     PSR  QSL
Sbjct: 836  LEAKRQHIMKLNKDLTHQLIELERYFNRLELDRYNEDGGHPVARRGVPNRSAPSRRVQSL 895

Query: 733  YSLYNTVNS 759
            +SL+NT++S
Sbjct: 896  HSLHNTMSS 904


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1816

 Score =  197 bits (500), Expect = 3e-48
 Identities = 111/249 (44%), Positives = 165/249 (66%), Gaps = 7/249 (2%)
 Frame = +1

Query: 34   VHSSANINQSGGQRTSVDAG--KFESVPTIRSSQLSQGSSAPGKSFNFKLQPTQEASKVP 207
            V + +N++   GQ    + G  K E +P+IR+SQLSQ   +     +F+   + +  K P
Sbjct: 661  VSALSNLSPLLGQNQDTNEGVEKIEPIPSIRASQLSQQVKS-----SFEKSASHQQHKTP 715

Query: 208  SSPVLLASAPALSKHLGSVNEMAGDLDNLLQSIEKEGGYRDNCT--QKSSVLSLEQELEK 381
             S   L     +S    ++NEMA ++D LLQSIE  GG++D+C    KS+V  LEQ LE 
Sbjct: 716  LSTGPLRLEHNMSNQPSNINEMAREMDTLLQSIEGPGGFKDSCAFILKSNVEELEQGLES 775

Query: 382  LSWKCREWRNTMEERLEEIQHLFDKTVQVLSRQIYIEGFVKQSSDSQYQDLLNRQKLSPE 561
            L+ KC+ W++T+ E+  EIQHL DKT+QVL+++ Y+EG  KQ++D+QY  L NRQKL+PE
Sbjct: 776  LAGKCQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPE 835

Query: 562  LEQKRQRMLKVNQELTNQLIQLERHFNTLELDKFDKTTVGYSASRTI---LEPSRHSQSL 732
            LE KRQ ++K+N++LT+QLI+LER+FN LELD++++      A R +     PSR  QSL
Sbjct: 836  LEAKRQHIMKLNKDLTHQLIELERYFNRLELDRYNEDGGHPVARRGVPNRSAPSRRVQSL 895

Query: 733  YSLYNTVNS 759
            +SL+NT++S
Sbjct: 896  HSLHNTMSS 904


Top