BLASTX nr result

ID: Papaver23_contig00015365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00015365
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...    72   2e-10
ref|XP_003621679.1| F-box/LRR-repeat protein [Medicago truncatul...    71   3e-10
ref|XP_003598169.1| F-box family-3 [Medicago truncatula] gi|3554...    71   3e-10
ref|XP_003598147.1| F-box family-3 [Medicago truncatula] gi|3554...    71   3e-10
gb|ABN08774.1| Cyclin-like F-box [Medicago truncatula]                 71   3e-10

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 74/263 (28%), Positives = 106/263 (40%), Gaps = 7/263 (2%)
 Frame = +2

Query: 2   CVLSKRWRYLWTSLPVLKI-SDEFHYRESDVEDDYYIDRQDNRCVINRFIKFVDKVLSLR 178
           C+LS RW+ +W  +P L + S +F                        F KFV K+LS R
Sbjct: 55  CILSNRWKNVWKCVPTLVLHSSDF-------------------STFKNFTKFVSKILSHR 95

Query: 179 DNNSDILKFHFEYTPSYHWCDEKSERFVNTCIAAAASHNVQELCIKIKPSNDSEFLRLIS 358
           D    + +  FE   S        +R VN     A SHNVQ L I +K  +    L  +S
Sbjct: 96  DGTIALQELDFERVGSIE--PHLLKRIVN----YAFSHNVQRLGISVK-GDICHILPCVS 148

Query: 359 SCKSLTKLDLELSGYDDGEYSNCSVICIPREISFPRLESLCMNLEFFPFQDEESTNNFFS 538
           SC++LT L L +S      Y        P+ +  P L SL +    F   D+  T   FS
Sbjct: 149 SCRTLTSLKLSVSPKGRHNYGR---TLFPKSLDLPALTSLHLGNFVFCASDKGRTEP-FS 204

Query: 539 SFPNLESLVIVFRGWSSGFRDMNLTISLPKLKCF------SFKVEDQGYEINSVVKLYAP 700
            F  L SLVI            N T+   ++ C       +  + +   ++   ++L AP
Sbjct: 205 GFNKLNSLVI-----------DNCTVKDAQILCILSETLVNLTMRNHSSDVYK-IELSAP 252

Query: 701 SLSSFIFKSDMVTSFIVENLPSL 769
           SLS+F F           NL S+
Sbjct: 253 SLSTFAFTGTPYQKLCGSNLSSV 275


>ref|XP_003621679.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355496694|gb|AES77897.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 379

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2   CVLSKRWRYLWTSLPVLKISDEFHYRESDVEDDYYIDRQDNRCVINRFIKFVDKVLSLRD 181
           C+LSKRW  LW  LP L                          +++   KFV ++LSLR+
Sbjct: 55  CILSKRWNNLWKYLPTL--------------------------ILSSSNKFVSRILSLRN 88

Query: 182 NNSDILKFHFEYTPSYHWCDEKSERFVNTCIAAAASHNVQELCIKIKPSNDSEFLRLISS 361
            ++ +   HF+   + +       R +   I  A SH+VQEL I +  S+   F   + S
Sbjct: 89  ASTPLRALHFQRHGTMY------PRLLQRMIKYAVSHHVQELSINLS-SDIQHFPTCLFS 141

Query: 362 CKSLTKLDLELSGYDDGEYSNCSVICIPREISFPRLESLCMNLEFFPFQDEESTNNFFSS 541
           C +LT L L ++       +  +    P  ++ P L +L +    FP  D+  T   FS+
Sbjct: 142 CHTLTSLKLVIN-----HPTLYAGTLFPSSLNLPALATLFLESFTFPVDDDGHTEP-FSA 195

Query: 542 FPNLESLVIVFRGWSSGFRDMNLTISLPKLKCFSFKVEDQGYEIN-SVVKLYAPSLSSFI 718
           F +L SL+I  RG      + NL I    L   +    D G+  N   ++L  PSL +F+
Sbjct: 196 FSSLNSLII--RG-CKVLDEQNLWILSATLANLTL---DTGWAYNYGKIELSTPSLCTFV 249

Query: 719 F 721
           F
Sbjct: 250 F 250


>ref|XP_003598169.1| F-box family-3 [Medicago truncatula] gi|355487217|gb|AES68420.1|
           F-box family-3 [Medicago truncatula]
          Length = 408

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 81/269 (30%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
 Frame = +2

Query: 2   CVLSKRWRYLWTSLPVLKIS-DEFHYRESDVEDDYYIDRQDNRCVINRFIKFVDKVLSLR 178
           C+LSKRW  LW +L  L +S D F   ES                   F +F+  +LSLR
Sbjct: 37  CILSKRWINLWKTLSTLTLSVDHFSTEES-------------------FEQFISMLLSLR 77

Query: 179 DNNSDI--LKFHFEYTPSYHWCDEKSERFVNTCIAAAASHNVQELCIKIKPSNDSEFLRL 352
           D+++DI  L FHF+      W    S       I  A SHNVQ   I          ++ 
Sbjct: 78  DHSTDIHSLVFHFQ------WTHVLSRDLYLKTIEYAFSHNVQHFQILYTA------VKH 125

Query: 353 ISSC--KSLTKLDLELSGYD----DGEYSNCSVICIPREISFPRLESLCMNLEFFPFQDE 514
           + SC   S T   L L+G D     G Y    +       + P L +L +    F   D+
Sbjct: 126 LPSCFFSSHTLTSLNLTGKDLMVPSGYY---QIFPSSHSFNLPALTTLYLKHLSFSCNDD 182

Query: 515 E--STNNFFSSFPNLESLVI---VFRGWSSGFRD-----MNLTISLPKLKCFSFKVEDQG 664
           +  S  + FS+F  L +L+I   V RG +   R      +NLTI +    C+S  +    
Sbjct: 183 DDGSVVDPFSTFNMLNTLIIDRCVLRGNAQNLRISCTKLLNLTIRM--YGCYS-TITKPD 239

Query: 665 YEINSVVKLYAPSLSSFIFK-SDMVTSFI 748
           ++I   ++LYAP+L SF+F  +D +  F+
Sbjct: 240 FKIFFGLELYAPTLHSFVFNGADYIPKFV 268


>ref|XP_003598147.1| F-box family-3 [Medicago truncatula] gi|355487195|gb|AES68398.1|
           F-box family-3 [Medicago truncatula]
          Length = 530

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 81/269 (30%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
 Frame = +2

Query: 2   CVLSKRWRYLWTSLPVLKIS-DEFHYRESDVEDDYYIDRQDNRCVINRFIKFVDKVLSLR 178
           C+LSKRW  LW +L  L +S D F   ES                   F +F+  +LSLR
Sbjct: 51  CILSKRWINLWKTLSTLTLSVDHFSTEES-------------------FEQFISMLLSLR 91

Query: 179 DNNSDI--LKFHFEYTPSYHWCDEKSERFVNTCIAAAASHNVQELCIKIKPSNDSEFLRL 352
           D+++DI  L FHF+      W    S       I  A SHNVQ   I          ++ 
Sbjct: 92  DHSTDIHSLVFHFQ------WTHVLSRDLYLKTIEYAFSHNVQHFQILYTA------VKH 139

Query: 353 ISSC--KSLTKLDLELSGYD----DGEYSNCSVICIPREISFPRLESLCMNLEFFPFQDE 514
           + SC   S T   L L+G D     G Y    +       + P L +L +    F   D+
Sbjct: 140 LPSCFFSSHTLTSLNLTGKDLMVPSGYY---QIFPSSHSFNLPALTTLYLKHLSFSCNDD 196

Query: 515 E--STNNFFSSFPNLESLVI---VFRGWSSGFRD-----MNLTISLPKLKCFSFKVEDQG 664
           +  S  + FS+F  L +L+I   V RG +   R      +NLTI +    C+S  +    
Sbjct: 197 DDGSVVDPFSTFNMLNTLIIDRCVLRGNAQNLRISCTKLLNLTIRM--YGCYS-TITKPD 253

Query: 665 YEINSVVKLYAPSLSSFIFK-SDMVTSFI 748
           ++I   ++LYAP+L SF+F  +D +  F+
Sbjct: 254 FKIFFGLELYAPTLHSFVFNGADYIPKFV 282


>gb|ABN08774.1| Cyclin-like F-box [Medicago truncatula]
          Length = 359

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2   CVLSKRWRYLWTSLPVLKISDEFHYRESDVEDDYYIDRQDNRCVINRFIKFVDKVLSLRD 181
           C+LSKRW  LW  LP L                          +++   KFV ++LSLR+
Sbjct: 43  CILSKRWNNLWKYLPTL--------------------------ILSSSNKFVSRILSLRN 76

Query: 182 NNSDILKFHFEYTPSYHWCDEKSERFVNTCIAAAASHNVQELCIKIKPSNDSEFLRLISS 361
            ++ +   HF+   + +       R +   I  A SH+VQEL I +  S+   F   + S
Sbjct: 77  ASTPLRALHFQRHGTMY------PRLLQRMIKYAVSHHVQELSINLS-SDIQHFPTCLFS 129

Query: 362 CKSLTKLDLELSGYDDGEYSNCSVICIPREISFPRLESLCMNLEFFPFQDEESTNNFFSS 541
           C +LT L L ++       +  +    P  ++ P L +L +    FP  D+  T   FS+
Sbjct: 130 CHTLTSLKLVIN-----HPTLYAGTLFPSSLNLPALATLFLESFTFPVDDDGHTEP-FSA 183

Query: 542 FPNLESLVIVFRGWSSGFRDMNLTISLPKLKCFSFKVEDQGYEIN-SVVKLYAPSLSSFI 718
           F +L SL+I  RG      + NL I    L   +    D G+  N   ++L  PSL +F+
Sbjct: 184 FSSLNSLII--RG-CKVLDEQNLWILSATLANLTL---DTGWAYNYGKIELSTPSLCTFV 237

Query: 719 F 721
           F
Sbjct: 238 F 238


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