BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00015136
         (1436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   183   8e-44
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycin...   178   3e-42
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   178   4e-42
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   174   4e-41
ref|NP_201197.1| DNA topoisomerase III [Arabidopsis thaliana] gi...   174   7e-41

>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  183 bits (465), Expect = 8e-44
 Identities = 129/398 (32%), Positives = 197/398 (49%), Gaps = 18/398 (4%)
 Frame = -2

Query: 1414 ELQRILYDQEEHPDWGEHAXXXXXXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAG 1235
            +L  I+ +Q+EH  WG +A                    D        H PI PT  +AG
Sbjct: 353  DLHGIVREQQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKA------HPPIHPTKFSAG 406

Query: 1234 TENTWKDEEEKMFRLITQCFLASLSDPAYTRKFAVDMGFGDKSFA-SRGENITSPGFLDI 1058
             E  W  +  +++ L+ + FLA +S PA      V++    + F+ S+  N     +LD+
Sbjct: 407  -ERGWSQDHHRLYELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDV 465

Query: 1057 FNSENLVGSDLPNYEGKQEFKIPSISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHR 878
            +  E+  GS +P Y   Q+F   +++    ++   P ++++DLLS MD E IGT ATMH 
Sbjct: 466  YRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHD 525

Query: 877  HIQKLIDKKLIERNSGTMEITPTHLGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG- 701
            HI+KL+D+    +++ T   TPT+LG ALV GY+ M    W  +L   +E   + +  G 
Sbjct: 526  HIKKLLDRFYATKDANT-RFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGT 584

Query: 700  KDKDLVLDATLKKLEIWFRDILNGQLGIVRGMEQTWDIKT-----------NVVDQCPDC 554
            K KD VL + L++++  F D    +  ++  ME  ++               VV  C  C
Sbjct: 585  KRKDEVLASCLQQMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLC 644

Query: 553  KQSCRKLQKS-GGNFRVVCLN-TRCSSTYCCPSCIAEADVTSDQCTSCYQ---YLIEFKF 389
            + S   L+++  GN+ V CL   +C +    P  IAEA VTSD+CT C     YLI+FKF
Sbjct: 645  QDSDMVLKRNRDGNYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKF 704

Query: 388  LQDSTPTLYQGTHPGCIRCGDATLKALEEICGIGNKSS 275
             Q   P  Y   H GC+   D  L+ L EICG G++ S
Sbjct: 705  RQLEIPPNYNANHLGCVGGCDDILRQLTEICGTGSRVS 742


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycine max]
          Length = 913

 Score =  178 bits (452), Expect = 3e-42
 Identities = 134/440 (30%), Positives = 207/440 (47%), Gaps = 34/440 (7%)
 Frame = -2

Query: 1414 ELQRILYDQEEHPDWGEHAXXXXXXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAG 1235
            +L  I+ +Q+ HP+WG +A                    D        H PI PT  + G
Sbjct: 348  DLHTIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGHDDKA------HPPIYPTKFSTG 401

Query: 1234 TENTWKDEEEKMFRLITQCFLASLSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIF 1055
             E+ W  +  K++ L+ + FLA +S PA   +  V++    + F++ G  I    +LD++
Sbjct: 402  -ESGWSQDHRKLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVY 460

Query: 1054 NSENLVGSDLPNYEGKQEFKIPSISRGPLISMSAPPVTDSDLLSFMDSE--KIGTPATMH 881
              E+  GS +P Y   Q+F    ++    ++   P ++++DLLS+MD E  KIGT ATM 
Sbjct: 461  RYESWGGSMIPTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQ 520

Query: 880  RHIQKLIDKKLIERNSGTMEITPTHLGLALVKGYN--CMVNKNWWRDLIGYIEEGKRRIL 707
             HI+K++D+    ++S T   TPT+LG ALV GY+   M  K W  DL   +E+    + 
Sbjct: 521  DHIKKMLDRSYATKDSST-RFTPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVK 579

Query: 706  SG-KDKDLVLDATLKKLEIWFRDILNGQLGIVRGMEQTWDIKT-----------NVVDQC 563
             G K K  VL   L+K+E  F +    ++ ++  M   ++  T            VV +C
Sbjct: 580  KGDKSKAEVLVTILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRC 639

Query: 562  PDCKQSCRKLQKS-GGNFRVVCLN-TRCSSTYCCPSCIAEADVTSDQCTSCYQ---YLIE 398
              C++S   L+K+  GNF V C+   +C +    P  ++EA VT++ C  C     YLI+
Sbjct: 640  GLCQESDMLLRKNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQ 699

Query: 397  FKFLQDSTPTLYQGTHPGCIRCGDATLKALEEICGIGNKSSFSIKEP------------- 257
            FKF +   P  Y   H GCI   D  L  L EICG G +     + P             
Sbjct: 700  FKFRRLEIPPNYSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPR 759

Query: 256  QGR*RHCGLKGHNEAICSKR 197
            QG   +C   GH+   C  R
Sbjct: 760  QGACMNCRETGHSSTDCPLR 779


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  178 bits (451), Expect = 4e-42
 Identities = 121/403 (30%), Positives = 198/403 (49%), Gaps = 17/403 (4%)
 Frame = -2

Query: 1414 ELQRILYDQEEHPDWGEHAXXXXXXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAG 1235
            +L  I+ DQ+ HP WG +A                    D        H PI PT  + G
Sbjct: 350  DLHTIVRDQQAHPIWGSYAQRLLDPGTGLWRNPSTGGHDDKA------HPPIHPTKFSPG 403

Query: 1234 TENTWKDEEEKMFRLITQCFLASLSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIF 1055
             E  W  +  +++ L+ + FLA +S PA   +  V++    + F++ G  I +  +LD++
Sbjct: 404  -ETGWSQDHHRVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVY 462

Query: 1054 NSENLVGSDLPNYEGKQEFKIPSISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRH 875
              E+  GS +P Y   Q+F   +++    ++   P +++SDLLS MD   IGT ATMH H
Sbjct: 463  RFESWGGSMIPTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDH 522

Query: 874  IQKLIDKKLIERNSGTMEITPTHLGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-K 698
            I+KL+D+    +++ T   +PT+LG ALV GY+ M  + W  +L   +E   + +  G K
Sbjct: 523  IKKLLDRFYATKDANT-RFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHK 581

Query: 697  DKDLVLDATLKKLEIWFRDILNGQLGIVRGMEQTWD-----------IKTNVVDQCPDCK 551
             K  VL+  L++++  F D    ++ ++  M   ++              ++V QC  C+
Sbjct: 582  SKAEVLETCLQQMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCR 641

Query: 550  QSCRKLQKS-GGNFRVVCLN-TRCSSTYCCPSCIAEADVTSDQCTSCYQ---YLIEFKFL 386
            ++   L+++  GNF V C+   +C +    P  I EA VT+  C  C     YLI+FKF 
Sbjct: 642  ETNMVLRRNRDGNFMVGCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFR 701

Query: 385  QDSTPTLYQGTHPGCIRCGDATLKALEEICGIGNKSSFSIKEP 257
            Q   P  +   H GCI   D TL+ L +ICG G++     + P
Sbjct: 702  QLEIPPGFSVNHLGCIGGCDDTLRQLTDICGTGSRVQARARAP 744


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  174 bits (442), Expect = 4e-41
 Identities = 134/448 (29%), Positives = 211/448 (47%), Gaps = 30/448 (6%)
 Frame = -2

Query: 1414 ELQRILYDQEEHPDWGEHAXXXXXXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAG 1235
            +L  I+ +Q  HP WG +A                    D        H PI PT  +AG
Sbjct: 347  DLHGIVQEQLGHPIWGSYAQRLLDPGAGLWRNPSNGGHDDKA------HPPIHPTKFSAG 400

Query: 1234 TENTWKDEEEKMFRLITQCFLASLSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIF 1055
             E+ W  + ++++ L+ + FLA +S PA   +  V++    +SF+S G  I +  +LD++
Sbjct: 401  -ESGWSQDHQRLYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVY 459

Query: 1054 NSENLVGSDLPNYEGKQEFKIPSISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRH 875
              E+  GS +P Y   Q+F   +++    ++   P ++++DLL+ MD   IGT ATMH H
Sbjct: 460  RFESWGGSMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDH 519

Query: 874  IQKLIDKKLIERNSGTMEITPTHLGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-K 698
            I+KL+D+    ++S T   +PT+LG ALV GY+ M  + W   L   +E   + +  G K
Sbjct: 520  IKKLLDRFYATKDSNT-RFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTK 578

Query: 697  DKDLVLDATLKKLEIWFRDILNGQLGIVRGMEQTWDIKT-----------NVVDQCPDCK 551
             ++ VL   L++++  F D    ++ ++  M   ++              +VV QC  C+
Sbjct: 579  RRNEVLTTCLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQ 638

Query: 550  QSCRKL-QKSGGNFRVVCLN-TRCSSTYCCPSCIAEADVTSDQCTSCYQ---YLIEFKFL 386
            +S   L +K  GNF V CL   +C +    P  I+EA +T+  C  C     Y I+FKF 
Sbjct: 639  ESDMVLRRKPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFR 698

Query: 385  QDSTPTLYQGTHPGCIRCGDATLKALEEICGIG----------NKSSFSIKEPQGR*R-- 242
            +   P  Y   H GC+   D  L+ L EICG G          N SS + +    R    
Sbjct: 699  RLEIPPNYNIDHLGCVCGCDEILRQLTEICGTGSRISARGRGSNASSTNAQRSNTRQTAC 758

Query: 241  -HCGLKGHNEAICSKRTWTSEPSSP*RS 161
             HC   GH+   C  R   S  S   R+
Sbjct: 759  IHCSQTGHSSNDCPSRVPRSRNSQSHRT 786


>ref|NP_201197.1| DNA topoisomerase III [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| DNA topoisomerase III
            [Arabidopsis thaliana]
          Length = 926

 Score =  174 bits (440), Expect = 7e-41
 Identities = 131/446 (29%), Positives = 209/446 (46%), Gaps = 31/446 (6%)
 Frame = -2

Query: 1414 ELQRILYDQEEHPDWGEHAXXXXXXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAG 1235
            +L+ ++ +Q  HP WG +A                    D        H PI PT  ++G
Sbjct: 355  DLRAMVEEQTRHPAWGSYAQRLLEPEGGLWRNPANGGHDDKA------HPPIHPTKFSSG 408

Query: 1234 TENTWKDEEEKMFRLITQCFLASLSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIF 1055
             E+ W  +   ++ L+ + +LA +S PA   +  V++    + F++ G  I +  +L+++
Sbjct: 409  -ESNWSRDHLNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVY 467

Query: 1054 NSENLVGSDLPNYEGKQEFKIPSISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRH 875
              E+  GS +P YE  Q+F   +++    ++   P + ++DLLS MD   IGT ATMH H
Sbjct: 468  RFESWGGSVIPVYEKGQQFIPTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDH 527

Query: 874  IQKLIDKKLIERNSGTMEITPTHLGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-K 698
            I+KL+D+    +++ T   +PT+LG ALV GY+ M  + W  +L   +E     +  G K
Sbjct: 528  IKKLLDRGYATKDANT-RFSPTNLGEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRK 586

Query: 697  DKDLVLDATLKKLEIWFRDILNGQLGIVRGMEQTWDIKTN-----------VVDQCPDCK 551
             K  VL+  L++++  F D    +  ++  M   ++   N           VV +C  C 
Sbjct: 587  TKAEVLETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLCN 646

Query: 550  QSCRKLQKS-GGNFRVVCLN-TRCSSTYCCPSCIAEADVTSDQCTSCYQ---YLIEFKFL 386
            +S   L+K+  GNF V C+N  +C +    P    EA VT++ C SC     Y I FKF 
Sbjct: 647  ESDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFR 706

Query: 385  QDSTPTLYQGTHPGCIRCGDATLKALEEICGIGNKS----------SFSIKEPQGR*R-- 242
            Q   P  +   H GC+   D  LK L +ICG G++S          S +I+    R    
Sbjct: 707  QIGIPPGFDVNHLGCVGGCDDILKQLIDICGTGSRSQARRTPGTAPSNNIQGSNTRQSNV 766

Query: 241  --HCGLKGHNEAICSKRTWTSEPSSP 170
              HC  +GH    C  R   S  S P
Sbjct: 767  CIHCQQRGHASTNCPSRVPASRNSRP 792