BLASTX nr result

ID: Papaver23_contig00015017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00015017
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform...    57   4e-06
ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus ...    57   5e-06

>ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform 1 [Vitis vinifera]
           gi|225435257|ref|XP_002285012.1| PREDICTED: DNA-binding
           protein S1FA2 isoform 2 [Vitis vinifera]
           gi|297746228|emb|CBI16284.3| unnamed protein product
           [Vitis vinifera]
          Length = 89

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 32/76 (42%), Positives = 35/76 (46%)
 Frame = +3

Query: 162 SLDHMANAKADVVAKGFNPXXXXXXXXXXXXXXXXXXNYILYVYAQRTIGPXXXXXXXXX 341
           S + M N   D  AKGFNP                  NY LYVYAQ+T+ P         
Sbjct: 14  SFERMGNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKKPVSKK 73

Query: 342 XXXXERLKQGVSAPGE 389
               ERLKQGVSAPGE
Sbjct: 74  KMKKERLKQGVSAPGE 89


>ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus communis]
           gi|223535464|gb|EEF37133.1| DNA-binding protein S1FA,
           putative [Ricinus communis]
          Length = 89

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 30/76 (39%), Positives = 36/76 (47%)
 Frame = +3

Query: 162 SLDHMANAKADVVAKGFNPXXXXXXXXXXXXXXXXXXNYILYVYAQRTIGPXXXXXXXXX 341
           S  +M N   DV  KGFNP                  NY+LY+YAQ+T+ P         
Sbjct: 14  SFQNMGNVVKDVETKGFNPGLIVLLVIGGIVLTFLIGNYVLYMYAQKTLPPKKKKPVSKK 73

Query: 342 XXXXERLKQGVSAPGE 389
               ERL+QGVSAPGE
Sbjct: 74  KMKRERLRQGVSAPGE 89


Top